RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FAM219BQ5XKK7 198 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 METTL2BQ6P1Q9 378 aaKnown RBP15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 SULF2Q8IWU5 870 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 ITLN2Q8WWU7 325 aaPredicted RBP15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 ATP6V1E2Q96A05 226 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 DGAT2Q96PD7 388 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 RASL10BQ96S79 203 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZBTB26Q9HCK0 441 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 SEMA4BQ9NPR2 832 aaPredicted RBP15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 MYOTQ9UBF9 498 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 COPS7AQ9UBW8 275 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 TMCO1Q9UM00 188 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 A0A0G2JMM0 328 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 A0A1W2PPB8 328 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 A0A1W2PRS3 328 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 A8MVJ9 347 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 KIR3DP1A8MWS1 328 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 ASNA1O43681 348 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 PEX1O43933 1283 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 GBAP04062 536 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 TUBB4AP04350 444 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 RPS17P08708 135 aaKnown RBP15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 ABHD2P08910 425 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 NR2F6P10588 404 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 COX7A2P14406 83 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 PTX3P26022 381 aaPredicted RBP15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 GCAP28676 217 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 PTGER1P34995 402 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 BUD31P41223 144 aaPredicted RBP15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 STT3AP46977 705 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 CASP6P55212 293 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 RNF4P78317 190 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 PLIN5Q00G26 463 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 CUL3Q13618 768 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 CYP20A1Q6UW02 462 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 DGAT2L6Q6ZPD8 337 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 NUDT13Q86X67 352 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 GHDCQ8N2G8 530 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 CEP112Q8N8E3 955 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 PSD4Q8NDX1 1056 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 DOK4Q8TEW6 326 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF721Q8TF20 911 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 MTFMTQ96DP5 389 aaKnown RBP15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 MRPL46Q9H2W6 279 aaKnown RBP15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 TIMMDC1Q9NPL8 285 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 HPF1Q9NWY4 346 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 LYARQ9NX58 379 aaKnown RBP15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 MS4A12Q9NXJ0 267 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF835Q9Y2P0 537 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 CREBBPQ92793 2442 aa15.96■□□□□ 0.15
CDC42BPB-208ENST00000561271 LRBAP50851 2863 aa15.96■□□□□ 0.14
CDC42BPB-208ENST00000561271 A0A1B0GTL3 188 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 GLOD5A6NK44 160 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 A8MT66 165 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 PRSS44E7EML9 344 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 KLRC4-KLRK1H3BQV0 150 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 HRKO00198 91 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 ZNF354AO60765 605 aaPredicted RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 AIFM1O95831 613 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 SNRPAP09012 282 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 SBK3P0C264 359 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 RHOXF2BP0C7M4 288 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 COL6A2P12110 1019 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 ABOP16442 354 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 ARFIP1P53367 373 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 MRM1Q6IN84 353 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 IL20RBQ6UXL0 311 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 SPPL2CQ8IUH8 684 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 CHERPQ8IWX8 916 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 GSPT2Q8IYD1 628 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 POGLUT1Q8NBL1 392 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 PPWD1Q96BP3 646 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 MRPL57Q9BQC6 102 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 RHOXF2Q9BQY4 288 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 DDX31Q9H8H2 851 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 DEPPQ9NTK1 212 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 ASB4Q9Y574 426 aa15.95■□□□□ 0.14
CDC42BPB-208ENST00000561271 A0A1W2PR48 441 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 PINLYPA6NC86 204 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 WASHC1A8K0Z3 465 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 G3V3Y1 287 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 FOXE1O00358 373 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 RIPK2O43353 540 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 PROM1O43490 865 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 HS6ST1O60243 411 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 SEMA3DO95025 777 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 FAM153BP0C7A2 387 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 FAM58BPP0C7Q3 252 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 ALOX15P16050 662 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 TSPAN8P19075 237 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 TLX1P31314 330 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 ADORA2A-AS1P86434 159 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 FAM153CQ494X1 144 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 SGO1Q5FBB7 561 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 FRG2Q64ET8 278 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 TTC19Q6DKK2 380 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 Q6ZPB1 254 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 NCCRP1Q6ZVX7 275 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 FGD2Q7Z6J4 655 aa15.94■□□□□ 0.14
CDC42BPB-208ENST00000561271 MRGPRGQ86SM5 289 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms