RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OCRLQ01968 901 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ID2Q02363 134 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 FOLH1Q04609 750 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 CHAF1BQ13112 559 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 MYBPC3Q14896 1274 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ZNHIT3Q15649 155 aaPredicted RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 MEP1AQ16819 746 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 SMU1Q2TAY7 513 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 LSM12Q3MHD2 195 aaKnown RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 SPDYE7PQ495Y7 208 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 CRB2Q5IJ48 1285 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 VWA5B1Q5TIE3 1220 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 FAM69BQ5VUD6 431 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 C18orf63Q68DL7 685 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 TMEM205Q6UW68 189 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ISLR2Q6UXK2 745 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 HSDL2Q6YN16 418 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ZNF793Q6ZN11 406 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ASB18Q6ZVZ8 466 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 PPP1R32Q7Z5V6 425 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 UBE3DQ7Z6J8 389 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 OR4N5Q8IXE1 308 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ST13P4Q8IZP2 240 aaPredicted RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 TMEM156Q8N614 296 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 FAM98AQ8NCA5 519 aaKnown RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 SNRNP27Q8WVK2 155 aaKnown RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 EXOSC8Q96B26 276 aaKnown RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 VMP1Q96GC9 406 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 NUF2Q9BZD4 464 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 DPY30Q9C005 99 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 SLAMF7Q9NQ25 335 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 MRGBPQ9NV56 204 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 C5AR2Q9P296 337 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 PTGFRNQ9P2B2 879 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ASB4Q9Y574 426 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 MYO15AQ9UKN7 3530 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 IGHV3-20A0A0C4DH32 117 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 A0A1W2PR48 441 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 SAGE2PA6NJ88 616 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 CYR61O00622 381 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 SOCS6O14544 535 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 AKAP10O43572 662 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 ITM2AO43736 263 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TGDSO95455 350 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 ETHE1O95571 254 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 IL3P08700 152 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 DDCP20711 480 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TPP2P29144 1249 aaPredicted RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 STT3AP46977 705 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 CLNS1AP54105 237 aaKnown RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 MANFP55145 182 aaKnown RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 RPP38P78345 283 aaKnown RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 RHAGQ02094 409 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 EMX2Q04743 252 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TBL3Q12788 808 aaKnown RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 RAPSNQ13702 412 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 ZNF267Q14586 743 aaPredicted RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 TERF2Q15554 542 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 PGS1Q32NB8 556 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 CPTPQ5TA50 214 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 IL23RQ5VWK5 629 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 PLAG1Q6DJT9 500 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 BHLHB9Q6PI77 547 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 RNF111Q6ZNA4 994 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 RNF165Q6ZSG1 346 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 LANCL3Q6ZV70 420 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 SZRD1Q7Z422 152 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 GALNT12Q8IXK2 581 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TAGAPQ8N103 731 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 LIX1Q8N485 282 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 ARHGEF39Q8N4T4 335 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 B3GNT7Q8NFL0 401 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 CEP70Q8NHQ1 597 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TSLPQ969D9 159 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TM4SF18Q96CE8 201 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 ZBED6CLQ96FA7 236 aaPredicted RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 CHMP6Q96FZ7 201 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 LMF1Q96S06 567 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 SIKE1Q9BRV8 207 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 TRIM55Q9BYV6 548 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 SLC25A18Q9H1K4 315 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 C3orf14Q9HBI5 128 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 NECTIN3Q9NQS3 549 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 LANCL2Q9NS86 450 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 PNPOQ9NVS9 261 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 EHD3Q9NZN3 535 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 KCMF1Q9P0J7 381 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 PRODH2Q9UF12 536 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 ZNF225Q9UK10 706 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 MRTO4Q9UKD2 239 aaKnown RBP10.04□□□□□ -0.8
TPM1-229ENST00000561242 ERVK-11Q9UQG0 969 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
TPM1-229ENST00000561242 LOC102723996A0A087X1L8 192 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 TRBV11-1A0A0K0K1C0 115 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 TCRBV16S1A1N1A0A5B0 115 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms