RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 IL1RAPL1Q9NZN1 696 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 C6orf203Q9P0P8 240 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 XPR1Q9UBH6 696 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF282Q9UDV7 671 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF629Q9UEG4 869 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 CHKBQ9Y259 395 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 COLEC10Q9Y6Z7 277 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 C1orf232A0A0U1RR37 186 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 HYKKA2RU49 373 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 TMEM89A2RUT3 159 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 PINLYPA6NC86 204 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 DFFAO00273 331 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 FCHO1O14526 889 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 GAPDHSO14556 408 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 BCKDKO14874 412 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 WDR1O75083 606 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 MT-CYBP00156 380 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 IGHG3P01860 377 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 GRPP07492 148 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 CYP11B1P15538 503 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ITGA2P17301 1181 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 UGT1A1P22309 533 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ATP5F1P24539 256 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 NDUFS1P28331 727 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 RFC1P35251 1148 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 KRT9P35527 623 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 HSPA9P38646 679 aaKnown RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 ARHGAP25P42331 645 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 PTPN9P43378 593 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ZNF136P52737 540 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 DCDC1P59894 354 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 AP2B1P63010 937 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 FOXO1Q12778 655 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 VEZF1Q14119 521 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 TRIM14Q14142 442 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 TAZQ16635 292 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ATP13A5Q4VNC0 1218 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 RNASE12Q5GAN4 147 aaKnown RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 C1orf185Q5T7R7 199 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 RNF187Q5TA31 235 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 ALS2CLQ60I27 953 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 PDPK2PQ6A1A2 396 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 GJB7Q6PEY0 223 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 IL17RELQ6ZVW7 336 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 PLEKHM3Q6ZWE6 761 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 CENPQQ7L2Z9 268 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 OTOAQ7RTW8 1153 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 GAS2L3Q86XJ1 694 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 SAMD14Q8IZD0 417 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 NDUFAF2Q8N183 169 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 TNIP2Q8NFZ5 429 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 OR52E1Q8NGJ3 308 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 JOSD2Q8TAC2 188 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 CREB3L4Q8TEY5 395 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 FAM172AQ8WUF8 416 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 MVB12AQ96EY5 273 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 LRRC46Q96FV0 321 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 MARK4Q96L34 752 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 RMDN2Q96LZ7 410 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ZNF396Q96N95 335 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 VPS35Q96QK1 796 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 TUBGCP2Q9BSJ2 902 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ZSCAN5AQ9BUG6 496 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 CDCP1Q9H5V8 836 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 CXorf36Q9H7Y0 433 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ZDHHC11Q9H8X9 412 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 KCNK13Q9HB14 408 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 IRAK4Q9NWZ3 460 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 ASIC5Q9NY37 505 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 STOX2Q9P2F5 926 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 MTRF1LQ9UGC7 380 aaKnown RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 ARMCX3Q9UH62 379 aaPredicted RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 ACSL5Q9ULC5 683 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 FZD10Q9ULW2 581 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 SHOC2Q9UQ13 582 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 KLHL20Q9Y2M5 609 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 WBP11Q9Y2W2 641 aaKnown RBP3.44□□□□□ -1.86
HERC1-211ENST00000560983 LIPGQ9Y5X9 500 aa3.44□□□□□ -1.86
HERC1-211ENST00000560983 A0A0J9YY10 115 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 FEZF1A0PJY2 475 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 MGAT4DA6NG13 374 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 OR2AG2A6NM03 316 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 ANKRD66B4E2M5 251 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 KLRC4-KLRK1H3BQV0 150 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 SOCS2O14508 198 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 SLC16A5O15375 505 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 P4HA2O15460 535 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 CTIFO43310 598 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 TCF21O43680 179 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 LMX1BO60663 402 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 GLSO94925 669 aaPredicted RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 VENTXO95231 258 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 POLBP06746 335 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 HEXBP07686 556 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 TMIGD3P0DMS9 266 aaPredicted RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 ERCC2P18074 760 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 IGFBP5P24593 272 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 PEBP1P30086 187 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms