RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 MYLK4Q86YV6 388 aaPredicted RBP12.93□□□□□ -0.34
USP8-215ENST00000560982 OR4N5Q8IXE1 308 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 TMEM251Q8N6I4 163 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 FBXO25Q8TCJ0 367 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 NXNL1Q96CM4 212 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 SGCZQ96LD1 299 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 DGAT2Q96PD7 388 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 TREX2Q9BQ50 279 aaPredicted RBP12.93□□□□□ -0.34
USP8-215ENST00000560982 RAB17Q9H0T7 212 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 IL1RL2Q9HB29 575 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 PNPLA3Q9NST1 481 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 SACM1LQ9NTJ5 587 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 MS4A12Q9NXJ0 267 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 ADGRE2Q9UHX3 823 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 ACOT9Q9Y305 439 aa12.93□□□□□ -0.34
USP8-215ENST00000560982 ZNF407Q9C0G0 2248 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 NKX2-6A6NCS4 301 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 SYCE1LA8MT33 242 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 DYRK3O43781 588 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 P04436 131 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 MTHFD2P13995 350 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 CAPN3P20807 821 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 MAGEA5P43359 124 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 DNASE1L1P49184 302 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 PLIN5Q00G26 463 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 PMPCAQ10713 525 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 ASPHQ12797 758 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 NAB1Q13506 487 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 MPEG1Q2M385 716 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 GXYLT1Q4G148 440 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 CCDC71Q8IV32 467 aaPredicted RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 FAM109AQ8N4B1 249 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 TEX9Q8N6V9 391 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 OR5M9Q8NGP3 310 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 OR5M3Q8NGP4 307 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 LILRB4Q8NHJ6 448 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 HUS1BQ8NHY5 278 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 NUBPLQ8TB37 319 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 KCTD4Q8WVF5 259 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 PHF3Q92576 2039 aaKnown RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 RGMAQ96B86 450 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 PPWD1Q96BP3 646 aaKnown RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 RBM18Q96H35 190 aaKnown RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 SENP5Q96HI0 755 aaPredicted RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 SMC6Q96SB8 1091 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 MTERF1Q99551 399 aaKnown RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 CENPKQ9BS16 269 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 RPF2Q9H7B2 306 aaKnown RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 MCCC2Q9HCC0 563 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 PHF11Q9UIL8 331 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 ANGPTL3Q9Y5C1 460 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
USP8-215ENST00000560982 ANKRD17O75179 2603 aaKnown RBP12.92□□□□□ -0.34
USP8-215ENST00000560982 HCFC1P51610 2035 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 A0A087X1B8 175 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 PLPP1O14494 284 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 BCKDKO14874 412 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 IGHG3P01860 377 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 IGKV3-11P04433 115 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 CCL3P10147 92 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 GFAPP14136 432 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 TLX1P31314 330 aaPredicted RBP12.91□□□□□ -0.34
USP8-215ENST00000560982 PIK3CBP42338 1070 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 NUP107P57740 925 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 IRF9Q00978 393 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 TNFRSF17Q02223 184 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 FOLH1Q04609 750 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 BIKQ13323 160 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 TRADDQ15628 312 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 PIGGQ5H8A4 983 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 C18orf63Q68DL7 685 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 ZDHHC24Q6UX98 284 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 DGAT2L6Q6ZPD8 337 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 ACAD11Q709F0 780 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 TRILQ7L0X0 811 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 GPR180Q86V85 440 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 C9orf40Q8IXQ3 194 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 CENPLQ8N0S6 344 aaPredicted RBP12.91□□□□□ -0.34
USP8-215ENST00000560982 ZCCHC7Q8N3Z6 543 aaKnown RBP12.91□□□□□ -0.34
USP8-215ENST00000560982 RHEBL1Q8TAI7 183 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 SLC22A8Q8TCC7 542 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 TANKQ92844 425 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 ART5Q96L15 291 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 UCK2Q9BZX2 261 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 ACTR8Q9H981 624 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 KCNJ16Q9NPI9 418 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 DMRT3Q9NQL9 472 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 TUBA8Q9NY65 449 aaPredicted RBP12.91□□□□□ -0.34
USP8-215ENST00000560982 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
USP8-215ENST00000560982 AKAP9Q99996 3911 aa12.9□□□□□ -0.34
USP8-215ENST00000560982 A0A1B0GVC2 190 aa12.9□□□□□ -0.34
USP8-215ENST00000560982 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.34
USP8-215ENST00000560982 FIGNL2A6NMB9 653 aa12.9□□□□□ -0.34
USP8-215ENST00000560982 HRKO00198 91 aa12.9□□□□□ -0.34
USP8-215ENST00000560982 PRKRAO75569 313 aaKnown RBP12.9□□□□□ -0.34
USP8-215ENST00000560982 ATP6AP2O75787 350 aa12.9□□□□□ -0.34
USP8-215ENST00000560982 TOXO94900 526 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms