RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 FBXO17Q96EF6 278 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PRR11Q96HE9 360 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 ZNF285Q96NJ3 590 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CASD1Q96PB1 797 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 TECTBQ96PL2 329 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PPP1R2P1Q96PQ5 205 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PANX3Q96QZ0 392 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 KRT12Q99456 494 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 NPAS2Q99743 824 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 TMEM47Q9BQJ4 181 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 COPS4Q9BT78 406 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNF111-211ENST00000560952 ALG12Q9BV10 488 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 TEKT3Q9BXF9 490 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ALOXE3Q9BYJ1 711 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ROPN1BQ9BZX4 212 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 GPR88Q9GZN0 384 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 IL22Q9GZX6 179 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SIK2Q9H0K1 926 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 C11orf49Q9H6J7 331 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 RANBP3Q9H6Z4 567 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 VIPAS39Q9H9C1 493 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ROPN1Q9HAT0 212 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 MCCC2Q9HCC0 563 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 HEYLQ9NQ87 328 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 KLHL1Q9NR64 748 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 YAE1D1Q9NRH1 226 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SAMSN1Q9NSI8 373 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 TXLNGQ9NUQ3 528 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 POT1Q9NUX5 634 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 IMP3Q9NV31 184 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 BEX4Q9NWD9 120 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 ADAM22Q9P0K1 906 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ABCD2Q9UBJ2 740 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 UPB1Q9UBR1 384 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SEC14L3Q9UDX4 400 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 NUP50Q9UKX7 468 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 AGO1Q9UL18 857 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 GDAQ9Y2T3 454 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 L3MBTL1Q9Y468 752 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 WIF1Q9Y5W5 379 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 AQRO60306 1485 aaKnown RBP eCLIP2.38□□□□□ -2.036e-6■■■■□ 25.1
RNF111-211ENST00000560952 CACNA1GO43497 2377 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SYNJ1O43426 1573 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 MAST3O60307 1309 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ATXN2Q99700 1313 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 STK36Q9NRP7 1315 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 NCAPD2Q15021 1401 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 YDJCA8MPS7 323 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PYCARD-AS1I3L0S3 204 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 TCAPO15273 167 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SELENOFO60613 162 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 TSPAN2O60636 221 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PRAMEF2O60811 474 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CNOT3O75175 753 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 DFFBO76075 338 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PRSS23O95084 383 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SYF2O95926 243 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 TOP3BO95985 862 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 GUSBP08236 651 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ELFN1P0C7U0 828 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 FTH1P19P0C7X4 201 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 EBLN1P0CF75 366 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CBSLP0DN79 551 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CTSAP10619 480 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PNMTP11086 282 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 EGR2P11161 476 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 ENO3P13929 434 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 PFKFB1P16118 471 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PPP3CBP16298 524 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 ZNF18P17022 549 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PAICSP22234 425 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 UGT1A4P22310 534 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 EEF1B2P24534 225 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 MST1P26927 711 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CD6P30203 668 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 UGT1A3P35503 534 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 UGT1A5P35504 534 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CBSP35520 551 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CEACAM3P40198 252 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SLC6A9P48067 706 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 GMPSP49915 693 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 CCNG1P51959 295 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PGDP52209 483 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PNLIPRP2P54317 469 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PKNOX1P55347 436 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 C1QTNF8P60827 252 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 RPL23AP62750 156 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 POU6F2P78424 691 aaPredicted RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 HPCAP84074 193 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 CNTN2Q02246 1040 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SLAMF1Q13291 335 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PDE7AQ13946 482 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SLC29A2Q14542 456 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 STXBP2Q15833 593 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 SLC15A2Q16348 729 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 EXT1Q16394 746 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 PHKG1Q16816 387 aa2.38□□□□□ -2.03
RNF111-211ENST00000560952 EIF2S3LQ2VIR3 472 aaKnown RBP2.38□□□□□ -2.03
RNF111-211ENST00000560952 TRIM16LQ309B1 348 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms