RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	KCNK13	Q9HB14	408 aa		11.52	□□□□□ -0.57
USP8-209	ENST00000560297	MIEF1	Q9NQG6	463 aa		11.52	□□□□□ -0.57
USP8-209	ENST00000560297	KLHL14	Q9P2G3	628 aa		11.52	□□□□□ -0.57
USP8-209	ENST00000560297	ADAM21	Q9UKJ8	722 aa		11.52	□□□□□ -0.57
USP8-209	ENST00000560297	CES1P1	Q9UKY3	287 aa		11.52	□□□□□ -0.57
USP8-209	ENST00000560297	TRIM33	Q9UPN9	1127 aa		11.52	□□□□□ -0.57
USP8-209	ENST00000560297	MRPS18B	Q9Y676	258 aa	Known RBP	11.52	□□□□□ -0.57
USP8-209	ENST00000560297	URB1	O60287	2271 aa	Known RBP	11.52	□□□□□ -0.57
USP8-209	ENST00000560297	LOC102723996	A0A087X1L8	192 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	TCRBV16S1A1N1	A0A5B0	115 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	OR2W5	A6NFC9	320 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	PEX12	O00623	359 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	EFS	O43281	561 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	TBX19	O60806	448 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	LDB3	O75112	727 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	MAOA	P21397	527 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	OTX2	P32243	289 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	HPCAL1	P37235	193 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	ARFIP2	P53365	341 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	SEC24C	P53992	1094 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	DIO3	P55073	304 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	OR4D2	P58180	307 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	C21orf58	P58505	322 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	IGLV3-21	P80748	117 aa	Predicted RBP	11.51	□□□□□ -0.57
USP8-209	ENST00000560297	FOLH1	Q04609	750 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	FAM69B	Q5VUD6	431 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	NATD1	Q8N6N6	113 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	CDC26	Q8NHZ8	85 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	EBF4	Q9BQW3	602 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	PELO	Q9BRX2	385 aa	Known RBP	11.51	□□□□□ -0.57
USP8-209	ENST00000560297	NECTIN3	Q9NQS3	549 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	GIMAP4	Q9NUV9	329 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	MRGBP	Q9NV56	204 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	AIG1	Q9NVV5	245 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	HEY2	Q9UBP5	337 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	UTS2R	Q9UKP6	389 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	ZNF780B	Q9Y6R6	833 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297	APC2	O95996	2303 aa		11.51	□□□□□ -0.57
USP8-209	ENST00000560297		A0A1W2PQ72	361 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	WASHC1	A8K0Z3	465 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	GABRR3	A8MPY1	467 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	NKX2-8	O15522	239 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	AKAP10	O43572	662 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	FGF17	O60258	216 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	PRKRA	O75569	313 aa	Known RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	FURIN	P09958	794 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ALDOC	P09972	364 aa	Known RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	SLC35E2	P0CK97	266 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ICAM2	P13598	275 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	POR	P16435	677 aa	Predicted RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	CSNK2A2	P19784	350 aa	Predicted RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	DRD4	P21917	467 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	GALNS	P34059	522 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	MPI	P34949	423 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	XK	P51811	444 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	TMPRSS3	P57727	454 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	FOXL2	P58012	376 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	SRSF6	Q13247	344 aa	Known RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	FAAH2	Q6GMR7	532 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	CGB2	Q6NT52	195 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	KIRREL2	Q6UWL6	708 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ANKRD37	Q7Z713	158 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	TICAM1	Q8IUC6	712 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	OR4N5	Q8IXE1	308 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	RIMKLA	Q8IXN7	391 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ADAMTS17	Q8TE56	1095 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	TSLP	Q969D9	159 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	UCN3	Q969E3	161 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	PPCDC	Q96CD2	204 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	CATSPER2	Q96P56	530 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	TMEM120A	Q9BXJ8	343 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	DPY30	Q9C005	99 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	BRINP2	Q9C0B6	783 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ZNF700	Q9H0M5	742 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	EPN3	Q9H201	632 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	SLC35C2	Q9NQQ7	365 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ATAD3A	Q9NVI7	634 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	TMEM45A	Q9NWC5	275 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ATP6V1H	Q9UI12	483 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	EXO1	Q9UQ84	846 aa	Known RBP	11.5	□□□□□ -0.57
USP8-209	ENST00000560297	CLDN16	Q9Y5I7	305 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	GPR45	Q9Y5Y3	372 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	HS3ST3B1	Q9Y662	390 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	AKAP13	Q12802	2813 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	ACACA	Q13085	2346 aa		11.5	□□□□□ -0.57
USP8-209	ENST00000560297	WDFY3	Q8IZQ1	3526 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	CDC14C	A4D256	554 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297		E9PBE3	544 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297		K7ENP7	123 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	SOCS6	O14544	535 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	SCAMP2	O15127	329 aa	Known RBP	11.49	□□□□□ -0.57
USP8-209	ENST00000560297	DYRK3	O43781	588 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	KLHL41	O60662	606 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	ERAL1	O75616	437 aa	Known RBP	11.49	□□□□□ -0.57
USP8-209	ENST00000560297	LRAT	O95237	230 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	IFNA16	P05015	189 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	CPM	P14384	443 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	COX7A2	P14406	83 aa		11.49	□□□□□ -0.57
USP8-209	ENST00000560297	WT1	P19544	449 aa	Predicted RBP	11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms