RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 LDB3O75112 727 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 CLEC3AO75596 197 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 KRT14P02533 472 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 C1QAP02745 245 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 IGKV3-11P04433 115 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 TNNI3P19429 210 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 ZNF10P21506 573 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 GSTM2P28161 218 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 MTTPP55157 894 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 PDAP1Q13442 181 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 SERTAD2Q14140 314 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 Q5PR19 223 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 CNTN4Q8IWV2 1026 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 C9orf40Q8IXQ3 194 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 SLC15A4Q8N697 577 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 ANKRD9Q96BM1 317 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 YIPF4Q9BSR8 244 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 NT5DC2Q9H857 520 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 HOMER3Q9NSC5 361 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 CNIH4Q9P003 139 aa18.14■□□□□ 0.49
RABGGTA-214ENST00000560163 MBD3L4A6NDZ8 208 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 MBD3L3A6NE82 208 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 MBD3L5A6NJ08 208 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 H2AFYO75367 372 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 TRIM3O75382 744 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 GNAZP19086 355 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 CTSSP25774 331 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 AGFG1P52594 562 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 RCN2Q14257 317 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 CRYMQ14894 314 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 POU4F3Q15319 338 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 TTC27Q6P3X3 843 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 GALNT7Q86SF2 657 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 RASGEF1CQ8N431 466 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 LIX1Q8N485 282 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 MBD3L2Q8NHZ7 208 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 SMPDL3BQ92485 455 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 SENP5Q96HI0 755 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 DACH2Q96NX9 599 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 PIP5K1AQ99755 562 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 COPS7AQ9UBW8 275 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 CNOT11Q9UKZ1 510 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 GUCA1BQ9UMX6 200 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 VWA7Q9Y334 891 aa18.13■□□□□ 0.49
RABGGTA-214ENST00000560163 C15orf38-AP3S2A0A0A6YYH1 394 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 CD8B2A6NJW9 211 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 IL18BPO95998 194 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 IGLV3-21P80748 117 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 CDKL1Q00532 357 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 SLBPQ14493 270 aaKnown RBP eCLIP18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 VASNQ6EMK4 673 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 TRIM40Q6P9F5 258 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 PRSS57Q6UWY2 283 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 CAPN12Q6ZSI9 719 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 VWA5B2Q8N398 1253 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 NAT8LQ8N9F0 302 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 SIMC1Q8NDZ2 872 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 OR10G3Q8NGC4 313 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 SLC22A8Q8TCC7 542 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 CCT6BQ92526 530 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 ZNF592Q92610 1267 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 HSPBAP1Q96EW2 488 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 RUNDC3BQ96NL0 473 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 LYRM4Q9HD34 91 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 ZNF490Q9ULM2 529 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 IKBKGQ9Y6K9 419 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 ARID1AO14497 2285 aa18.12■□□□□ 0.49
RABGGTA-214ENST00000560163 DOCK7Q96N67 2140 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 CDC7O00311 574 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 FBXO45P0C2W1 286 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 OPRM1P35372 400 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 GDF5P43026 501 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 SLC6A12P48065 614 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 ID2Q02363 134 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 NHSL2Q5HYW2 709 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 ADNP2Q6IQ32 1131 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 DGAT2L6Q6ZPD8 337 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 UBE3DQ7Z6J8 389 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 PM20D2Q8IYS1 436 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 DND1Q8IYX4 353 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 LRRN4CLQ8ND94 238 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 ANKRD7Q92527 254 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 MAPKAP1Q9BPZ7 522 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 PITHD1Q9GZP4 211 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 UBQLN3Q9H347 655 aa18.11■□□□□ 0.49
RABGGTA-214ENST00000560163 ANKRD33BA6NCL7 494 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 ANKDD1BA6NHY2 528 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 EEF1E1-BLOC1S5C9J1V9 151 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 INAFM1C9JVW0 142 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 HRKO00198 91 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 EEF1E1O43324 174 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 PRAMEF4O60810 478 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 HPNP05981 417 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 PGAM1P18669 254 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 GDF1P27539 372 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 HPDP32754 393 aaPredicted RBP18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 HNMTP50135 292 aa18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 SF3B4Q15427 424 aaKnown RBP eCLIP18.1■□□□□ 0.491e-7■■■■□ 25.6
RABGGTA-214ENST00000560163 C18orf21Q32NC0 220 aaPredicted RBP18.1■□□□□ 0.49
RABGGTA-214ENST00000560163 PRAMEF9Q5VWM5 478 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms