RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LRATO95237 230 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 ETHE1O95571 254 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 C1QAP02745 245 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HIST1H2AGP0C0S8 130 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 TPSB2P20231 275 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HIST1H2ADP20671 130 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 SAT1P21673 171 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 GDF1P27539 372 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HNRNPH1P31943 449 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 FOXF2Q12947 444 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 DHX34Q14147 1143 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 TPSAB1Q15661 275 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 PAQR3Q6TCH7 311 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 ACTRT1Q8TDG2 376 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 ZNF721Q8TF20 911 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 MS4A6EQ96DS6 147 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 SPACA9Q96E40 222 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 FAR2Q96K12 515 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HIST1H2AHQ96KK5 128 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 QRFPRQ96P65 431 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HIST1H2AJQ99878 128 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 H2AFJQ9BTM1 129 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 GSX2Q9BZM3 304 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HOMER3Q9NSC5 361 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 TESMINQ9Y4I5 508 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 ZCWPW2A0A1B0GU75 182 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 SYNDIG1LA6NDD5 238 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 ERI3O43414 337 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 B3GALT2O43825 422 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 ERN1O75460 977 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 TMIGD3P0DMS9 266 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 NID1P14543 1247 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 TNNI3P19429 210 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 FPR1P21462 350 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 PTH2RP49190 550 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 RGS4P49798 205 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 LIM2P55344 173 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 STXBP1P61764 594 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 TBL3Q12788 808 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 THOC5Q13769 683 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 CAPRIN1Q14444 709 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 SF3B4Q15427 424 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■■■■□ 25.6
RABGGTA-213ENST00000560127 DCST1Q5T197 706 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 VASNQ6EMK4 673 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 CASC4Q6P4E1 433 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 NXPE4Q6UWF7 544 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 SYDE1Q6ZW31 735 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 TMPRSS11BQ86T26 416 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 LUZP2Q86TE4 346 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 C9orf40Q8IXQ3 194 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 KLHDC8AQ8IYD2 350 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 MYO1HQ8N1T3 1032 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 OR10G3Q8NGC4 313 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 NUBPLQ8TB37 319 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 FBXL8Q96CD0 374 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 LINGO1Q96FE5 620 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 WDYHV1Q96HA8 205 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 NDNQ99608 321 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 CALHM2Q9HA72 323 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 CNOT11Q9UKZ1 510 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC6A5Q9Y345 797 aa11.72□□□□□ -0.53
RABGGTA-213ENST00000560127 LRIT2A6NDA9 550 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 CTIFO43310 598 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 LDB3O75112 727 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 TRIM3O75382 744 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 TRAPPC6AO75865 159 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 ACSL3O95573 720 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 GUCA1CO95843 209 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 TBX6O95947 436 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 FBXO45P0C2W1 286 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 SOX18P35713 384 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 SLCO1A2P46721 670 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 CPA2P48052 419 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 AP1S2P56377 157 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 GNG11P61952 73 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 CDK16Q00536 496 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 STX4Q12846 297 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 TRIP13Q15645 432 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 NHSL2Q5HYW2 709 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 ANKRD22Q5VYY1 191 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 ARMC3Q5W041 872 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 PODNL1Q6PEZ8 512 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 FAM13CQ8NE31 585 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC22A8Q8TCC7 542 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC44A1Q8WWI5 657 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 NTNG2Q96CW9 530 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 RUNDC3BQ96NL0 473 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 SECISBP2Q96T21 854 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 DOHHQ9BU89 302 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 UGT2B28Q9BY64 529 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms