RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 AKIRIN1Q9H9L7 192 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 BRF2Q9HAW0 419 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SAR1AQ9NR31 198 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 FGF21Q9NSA1 209 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CUTCQ9NTM9 273 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ARL8BQ9NVJ2 186 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 DLL3Q9NYJ7 618 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 FOXJ2Q9P0K8 574 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SEMA5BQ9P283 1151 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PDP2Q9P2J9 529 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 VPS29Q9UBQ0 182 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PISDQ9UG56 409 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 NDOR1Q9UHB4 597 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PLCL2Q9UPR0 1127 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 EXO1Q9UQ84 846 aaKnown RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 NAALAD2Q9Y3Q0 740 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ATG4BQ9Y4P1 393 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 GPR45Q9Y5Y3 372 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CELSR3Q9NYQ7 3312 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SCN2AQ99250 2005 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 GNG14A0A1W2PPG7 69 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 A0A1W2PR48 441 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 HYKKA2RU49 373 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ZNF503-AS2A6NEH8 195 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 DBX1A6NMT0 343 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ANKRD28O15084 1053 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 PGRMC2O15173 223 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ZNF749O43361 778 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 OR2B3O76000 313 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 UBOX5O94941 541 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 KCNK5O95279 499 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 AIFM1O95831 613 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 NTRK1P04629 796 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SERPINA6P08185 405 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ANXA4P09525 319 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 C8orf89P0DMQ9 161 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SMIM10L1P0DMW3 83 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 PIM1P11309 404 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 HSD3B1P14060 373 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ALOX12P18054 663 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CAPN3P20807 821 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 HIST1H1TP22492 207 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 PRPH2P23942 346 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 HRH2P25021 359 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CXCR2P25025 360 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ATP5A1P25705 553 aaKnown RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 PTX3P26022 381 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 HSD3B2P26439 372 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CSTF2P33240 577 aaKnown RBP eCLIP4.92□□□□□ -1.62
SPG11-220ENST00000559933 ALDH9A1P49189 494 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 LIMK1P53667 647 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 MAPK12P53778 367 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ITGA1P56199 1179 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 STXBP1P61764 594 aaKnown RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 EMX2Q04743 252 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 RGS1Q08116 209 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 KLF10Q13118 480 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TARDBPQ13148 414 aaKnown RBP eCLIP4.92□□□□□ -1.62
SPG11-220ENST00000559933 SLAMF1Q13291 335 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CUL3Q13618 768 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 UGT8Q16880 541 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ISXQ2M1V0 245 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 GTDC1Q4AE62 458 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TIGD2Q4W5G0 525 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 AGKQ53H12 422 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SPIN4Q56A73 249 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ZC3H12BQ5HYM0 836 aaKnown RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 SPANXN4Q5MJ08 99 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CCNYL2Q5T2Q4 361 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TMTC4Q5T4D3 741 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TRIM40Q6P9F5 258 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 FAM199XQ6PEV8 388 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 RNF165Q6ZSG1 346 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 COX15Q7KZN9 410 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 RAB11FIP2Q7L804 512 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ANKRD46Q86W74 232 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 NUDT13Q86X67 352 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SNX32Q86XE0 403 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TMEM126BQ8IUX1 230 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 FUNDC1Q8IVP5 155 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 OR4N5Q8IXE1 308 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CLEC4FQ8N1N0 589 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CA13Q8N1Q1 262 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CHCHD4Q8N4Q1 142 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TBC1D19Q8N5T2 526 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ACOT4Q8N9L9 421 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 GOLM1Q8NBJ4 401 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CAMKVQ8NCB2 501 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TRPV3Q8NET8 790 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TTLQ8NG68 377 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 OR2L5Q8NG80 312 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 OR7A2PQ8NGA2 310 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CEP70Q8NHQ1 597 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 ABHD4Q8TB40 342 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 C16orf78Q8WTQ4 265 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 RNF141Q8WVD5 230 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CIDECQ96AQ7 238 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 VPS33AQ96AX1 596 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 RGMAQ96B86 450 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 TM4SF18Q96CE8 201 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms