RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 DAZLQ92904 295 aaKnown RBP9.46□□□□□ -0.9
USP3-216ENST00000559873 TSLPQ969D9 159 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 TM4SF18Q96CE8 201 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 KLHL29Q96CT2 875 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 ZNF764Q96H86 408 aaPredicted RBP9.46□□□□□ -0.9
USP3-216ENST00000559873 ART5Q96L15 291 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 DGAT2Q96PD7 388 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 C1orf50Q9BV19 199 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 TRIM55Q9BYV6 548 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.9
USP3-216ENST00000559873 AKTIPQ9H8T0 292 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 ADAP2Q9NPF8 381 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 FBXL4Q9UKA2 621 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 UTS2RQ9UKP6 389 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 ZNF780BQ9Y6R6 833 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 FRYQ5TBA9 3013 aa9.46□□□□□ -0.9
USP3-216ENST00000559873 GOLGA8QA0A0J9YX86 632 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 GOLGA8OA6NCC3 632 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ARGFXA6NJG6 315 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 GOLGA8NF8WBI6 632 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 SDHDO14521 159 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 SOCS6O14544 535 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 LDB3O75112 727 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 DNAJB6O75190 326 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 GPR75O95800 540 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ITGB2P05107 769 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 COX6A1P12074 109 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 BCKDHAP12694 445 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ICAM2P13598 275 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ALOX15P16050 662 aaPredicted RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 SDC1P18827 310 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 EPHA3P29320 983 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 NTSP30990 170 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 STT3AP46977 705 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 HNRNPFP52597 415 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 AQP5P55064 265 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 FOXL2P58012 376 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 STX1BP61266 288 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 IRX1P78414 480 aaPredicted RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 BTG2P78543 158 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 IGLV3-21P80748 117 aaPredicted RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 FOLH1Q04609 750 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 C2orf80Q0P641 193 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 AIMP2Q13155 320 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 ELAVL1Q15717 326 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 EXT1Q16394 746 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 DEFB109BQ30KR1 87 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 IL23RQ5VWK5 629 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 BORAQ6PGQ7 559 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 PAPD4Q6PIY7 484 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 KIRREL2Q6UWL6 708 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 LANCL3Q6ZV70 420 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 SPATA19Q7Z5L4 167 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ST13P4Q8IZP2 240 aaPredicted RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 LIX1Q8N485 282 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 OR14A16Q8NHC5 309 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 C8orf44Q96CB5 159 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 MTERF3Q96E29 417 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 RBM18Q96H35 190 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 MAELQ96JY0 434 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 C3orf30Q96M34 536 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 TSSK3Q96PN8 268 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 PRPF18Q99633 342 aaKnown RBP9.45□□□□□ -0.9
USP3-216ENST00000559873 ALOXE3Q9BYJ1 711 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ZNF700Q9H0M5 742 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 TCF7L2Q9NQB0 619 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 ATAD3AQ9NVI7 634 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.45□□□□□ -0.9
USP3-216ENST00000559873 COPS7AQ9UBW8 275 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 GIMAP2Q9UG22 337 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 CLCA3PQ9Y6N3 262 aa9.45□□□□□ -0.9
USP3-216ENST00000559873 IGHV1-45A0A0A0MS14 117 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 SAGE2PA6NJ88 616 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 GLOD5A6NK44 160 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 FGF17O60258 216 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 PRKRAO75569 313 aaKnown RBP9.44□□□□□ -0.9
USP3-216ENST00000559873 ERAL1O75616 437 aaKnown RBP9.44□□□□□ -0.9
USP3-216ENST00000559873 SLC35E2P0CK97 266 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 CPMP14384 443 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 IDO1P14902 403 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 TNNI3P19429 210 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 CSNK2A2P19784 350 aaPredicted RBP9.44□□□□□ -0.9
USP3-216ENST00000559873 PRPS1L1P21108 318 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 GALNSP34059 522 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 CLNS1AP54105 237 aaKnown RBP9.44□□□□□ -0.9
USP3-216ENST00000559873 RHDQ02161 417 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 PCOLCEQ15113 449 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 RPS6KA2Q15349 733 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 DPY19L1Q2PZI1 675 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 DCAF10Q5QP82 559 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 ATP1A1-AS1Q5TC04 95 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 FAM71E1Q6IPT2 247 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 EPGNQ6UW88 154 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 RIPOR1Q6ZS17 1223 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 APLFQ8IW19 511 aaPredicted RBP9.44□□□□□ -0.9
USP3-216ENST00000559873 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
USP3-216ENST00000559873 KBTBD2Q8IY47 623 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms