RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TAAR6Q96RI8 345 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 ZBTB18Q99592 522 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 MTMR12Q9C0I1 747 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 VN1R1Q9GZP7 353 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 ARRDC1-AS1Q9H2J1 176 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 RAB9BQ9NP90 201 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 ACOXLQ9NUZ1 547 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 ZNF701Q9NV72 531 aaPredicted RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 INTS9Q9NV88 658 aaKnown RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 SPHK1Q9NYA1 384 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 GTSE1Q9NYZ3 720 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 NDUFA13Q9P0J0 144 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 VPS54Q9P1Q0 977 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 IL20RAQ9UHF4 553 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 ATP6V1HQ9UI12 483 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CHMP2BQ9UQN3 213 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 TMED3Q9Y3Q3 217 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 RAD54L2Q9Y4B4 1467 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 IL16Q14005 1332 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 C17orf105B2RV13 164 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 E9PI62 339 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 H0Y8G0 127 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 H3BMM5 538 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ACSL4O60488 711 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 CSO75390 466 aaKnown RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 GMNNO75496 209 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 TOM1L1O75674 476 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 STBD1O95210 358 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 NUDT17P0C025 328 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 HSPA8P11142 646 aaKnown RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 DRD5P21918 477 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 CA6P23280 308 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 FCARP24071 287 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 HTR2AP28223 471 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 HLA-FP30511 346 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 STIP1P31948 543 aaKnown RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 MNDAP41218 407 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 TNFRSF4P43489 277 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 OR3A3P47888 321 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ATP5OP48047 213 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 VAMP7P51809 220 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 HERV-K104P61576 105 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 UBE2HP62256 183 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 FKBP1BP68106 108 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 RPP38P78345 283 aaKnown RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 SP3Q02447 781 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 DDX39BQ13838 428 aaKnown RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 KRT31Q15323 416 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ZMYND11Q15326 602 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 PHKG1Q16816 387 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 IMMTQ16891 758 aaKnown RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 LDLRAP1Q5SW96 308 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 IL23RQ5VWK5 629 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 BSPRYQ5W0U4 402 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 CDHR3Q6ZTQ4 885 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 IL17RELQ6ZVW7 336 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 TAS2R42Q7RTR8 314 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 LRRC70Q7Z2Q7 622 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ADGRD2Q7Z7M1 963 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 CROCCP3Q8IVE0 287 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ZNF444Q8N0Y2 327 aaPredicted RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 NIPA2Q8N8Q9 360 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 OR13J1Q8NGT2 312 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 OR2T11Q8NH01 316 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 OR2T3Q8NH03 318 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 SAP25Q8TEE9 199 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 CHPT1Q8WUD6 406 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 RLN3Q8WXF3 142 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 IRGQQ8WZA9 623 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 DYRK2Q92630 601 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 C18orf12Q96KH6 178 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 GPR137Q96N19 417 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 NTMT1Q9BV86 223 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 LRRC2Q9BYS8 371 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 NACAP1Q9BZK3 213 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 MIS12Q9H081 205 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 THAP2Q9H0W7 228 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 SDCBP2Q9H190 292 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 DPEP3Q9H4B8 488 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ACTR8Q9H981 624 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 TRPV5Q9NQA5 729 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 PHPT1Q9NRX4 125 aaPredicted RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 C6orf203Q9P0P8 240 aaPredicted RBP3.2□□□□□ -1.9
SPG11-218ENST00000559754 ASIC3Q9UHC3 531 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 ERVK-19Q9WJR5 959 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 NAALAD2Q9Y3Q0 740 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 CUX2O14529 1486 aa3.2□□□□□ -1.9
SPG11-218ENST00000559754 PTCH1Q13635 1447 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 LOC101059948A0A1B0GTJ6 334 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ANKRD30BLA7E2S9 258 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 FAM25EA8MYX2 175 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 H0YC42 278 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 EEF2KO00418 725 aaKnown RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 GAPDHSO14556 408 aaPredicted RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 CHEK1O14757 476 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 XPO1O14980 1071 aaKnown RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 ARPC2O15144 300 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 LRP3O75074 770 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 KHDRBS3O75525 346 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms