RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MMACHCQ9Y4U1 282 aa8.48□□□□□ -1.05
HMG20A-209ENST00000559728 USH1CQ9Y6N9 552 aa8.48□□□□□ -1.05
HMG20A-209ENST00000559728 PKD1L2Q7Z442 2459 aa8.48□□□□□ -1.05
HMG20A-209ENST00000559728 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
HMG20A-209ENST00000559728 MAP1BP46821 2468 aaKnown RBP8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ITPR1Q14643 2758 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 DSPP15924 2871 aaKnown RBP8.47□□□□□ -1.05
HMG20A-209ENST00000559728 IGHV1-45A0A0A0MS14 117 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 IGHV3-20A0A0C4DH32 117 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 CDC14CA4D256 554 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ANKRD28O15084 1053 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 PRMT3O60678 531 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 LDB3O75112 727 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 HEXBP07686 556 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ANXA4P09525 319 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-209ENST00000559728 C8orf89P0DMQ9 161 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 NR2F6P10588 404 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 COX6A1P12074 109 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 JAK1P23458 1154 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 EPHA3P29320 983 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 OTX2P32243 289 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 GPR143P51810 404 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 DIO3P55073 304 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ID2Q02363 134 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 FOLH1Q04609 750 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 EMX2Q04743 252 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ZNF763Q0D2J5 394 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 PDE7AQ13946 482 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 CEBPEQ15744 281 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ST3GAL2Q16842 350 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 IMPG1Q17R60 797 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 GALNTL6Q49A17 601 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 CPZQ66K79 652 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 OGFOD2Q6N063 350 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 LRRC69Q6ZNQ3 347 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 CRLF3Q8IUI8 442 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 LRRC34Q8IZ02 419 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 NFAM1Q8NET5 270 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-209ENST00000559728 RFWD2Q8NHY2 731 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 DYDC1Q8WWB3 177 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 TUBGCP3Q96CW5 907 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 CNRIP1Q96F85 164 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-209ENST00000559728 IMMP1LQ96LU5 166 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 PPP3R2Q96LZ3 170 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 PTCHD1Q96NR3 888 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ARHGAP9Q9BRR9 750 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 C1orf50Q9BV19 199 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 ZNF700Q9H0M5 742 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 RPF2Q9H7B2 306 aaKnown RBP8.47□□□□□ -1.05
HMG20A-209ENST00000559728 MYNNQ9NPC7 610 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 PRTFDC1Q9NRG1 225 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 VTI1BQ9UEU0 232 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 TMED5Q9Y3A6 229 aa8.47□□□□□ -1.05
HMG20A-209ENST00000559728 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.05
HMG20A-209ENST00000559728 PTPRQQ9UMZ3 2332 aa8.46□□□□□ -1.05
HMG20A-209ENST00000559728 GOLGA8QA0A0J9YX86 632 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 GOLGA8OA6NCC3 632 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 GOLGA8NF8WBI6 632 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 SLCO1B7G3V0H7 640 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 PSMD12O00232 456 aaPredicted RBP8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TGDSO95455 350 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 GPR75O95800 540 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 CELA2AP08217 269 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 G6PDP11413 515 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 CD1EP15812 388 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 ZFP36L2P47974 494 aaKnown RBP8.46□□□□□ -1.06
HMG20A-209ENST00000559728 IDH3AP50213 366 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 UCNP55089 124 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TMPRSS3P57727 454 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 ERVK-8P63133 956 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 EEF1A2Q05639 463 aaKnown RBP8.46□□□□□ -1.06
HMG20A-209ENST00000559728 MGAT2Q10469 447 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 PTGR1Q14914 329 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 NSDHLQ15738 373 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 SMU1Q2TAY7 513 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 LINC00303Q3SY05 128 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF385BQ569K4 471 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 IL23RQ5VWK5 629 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TMEM198Q66K66 360 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 FAM180BQ6P0A1 224 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 CYP20A1Q6UW02 462 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 PCSK4Q6UW60 755 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 CPEB2Q7Z5Q1 589 aaKnown RBP8.46□□□□□ -1.06
HMG20A-209ENST00000559728 RIMKLAQ8IXN7 391 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 KIRREL3Q8IZU9 778 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 LIX1Q8N485 282 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 CLHC1Q8NHS4 586 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 PTPMT1Q8WUK0 201 aaPredicted RBP8.46□□□□□ -1.06
HMG20A-209ENST00000559728 THAP4Q8WY91 577 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TANKQ92844 425 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 THOC1Q96FV9 657 aaKnown RBP8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TEX37Q96LM6 180 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TSSK3Q96PN8 268 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 TRIM55Q9BYV6 548 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 SLAMF7Q9NQ25 335 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 FGFR1OP2Q9NVK5 253 aa8.46□□□□□ -1.06
HMG20A-209ENST00000559728 RIC8BQ9NVN3 520 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms