RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 CCL27Q9Y4X3 112 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 POLR3HQ9Y535 204 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 MRPS18BQ9Y676 258 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 WDFY3Q8IZQ1 3526 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 GNG14A0A1W2PPG7 69 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 OR2W5A6NFC9 320 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 HDAC3O15379 428 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 TMPRSS11DO60235 418 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 PCDH7O60245 1069 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 B4GALT2O60909 372 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 CNOT3O75175 753 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 RSL1D1O76021 490 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 MYO1DO94832 1006 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 FAM58BPP0C7Q3 252 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 LIFP15018 202 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 CPN2P22792 545 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 TPP2P29144 1249 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 LIM2P55344 173 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 RPS26P62854 115 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 RPL38P63173 70 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 NCF4Q15080 339 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 NKG7Q16617 165 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 MINDY4Q4G0A6 757 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 SPIN4Q56A73 249 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 FAAH2Q6GMR7 532 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 RGS9BPQ6ZS82 235 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 ZCCHC14Q8WYQ9 949 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 NPLQ9BXD5 320 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 DDX31Q9H8H2 851 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 MKKSQ9NPJ1 570 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 C1orf109Q9NX04 203 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 DKK4Q9UBT3 224 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 DAPP1Q9UN19 280 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 RAXQ9Y2V3 346 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 USH1CQ9Y6N9 552 aa11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 URB1O60287 2271 aaKnown RBP11.32□□□□□ -0.6
HMGB1P8-201ENST00000558211 CROCCQ5TZA2 2017 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 A0A0A6YYD5 115 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 TRPC5OSA6NMA1 111 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 LSM1O15116 133 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 RRP8O43159 456 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 EDF1O60869 148 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 PRKRAO75569 313 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 BMP10O95393 424 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ONECUT2O95948 504 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ANXA4P09525 319 aaPredicted RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 RAB40ALP0C0E4 278 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 PTPN4P29074 926 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 TIA1P31483 386 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 EIF2S3P41091 472 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 FOLR3P41439 243 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 TSFMP43897 325 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ARFIP1P53367 373 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 MAPK12P53778 367 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 RAB38P57729 211 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 RAE1P78406 368 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 KLC1Q07866 573 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ATP6AP1LQ52LC2 224 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 RFTN2Q52LD8 501 aaPredicted RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 XKR7Q5GH72 579 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 C18orf63Q68DL7 685 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 NXNQ6DKJ4 435 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 RNF165Q6ZSG1 346 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 GPR180Q86V85 440 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ZC3H7AQ8IWR0 971 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ZCCHC7Q8N3Z6 543 aaKnown RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 FNDC5Q8NAU1 212 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 FKBP10Q96AY3 582 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 TBC1D20Q96BZ9 403 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 PPP3R2Q96LZ3 170 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 CSF3RQ99062 836 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 CCT7Q99832 543 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 C1orf50Q9BV19 199 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ACTL8Q9H568 366 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 WDR55Q9H6Y2 383 aaPredicted RBP11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 FGFR1OP2Q9NVK5 253 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 CRIM1Q9NZV1 1036 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 KCMF1Q9P0J7 381 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 KCND3Q9UK17 655 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ADAM29Q9UKF5 820 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 PADI2Q9Y2J8 665 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 ATG4BQ9Y4P1 393 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 SPACA6W5XKT8 324 aa11.31□□□□□ -0.6
HMGB1P8-201ENST00000558211 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
HMGB1P8-201ENST00000558211 ACACAQ13085 2346 aa11.3□□□□□ -0.6
HMGB1P8-201ENST00000558211 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
HMGB1P8-201ENST00000558211 GLOD5A6NK44 160 aa11.3□□□□□ -0.6
HMGB1P8-201ENST00000558211 C21orf140B9A014 251 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms