RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 C16orf78Q8WTQ4 265 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 C3orf30Q96M34 536 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 LHPPQ9H008 270 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 ADNPQ9H2P0 1102 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 C1orf109Q9NX04 203 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 G3BP2Q9UN86 482 aaKnown RBP13.42□□□□□ -0.26
USP3-205ENST00000557884 TP53TG5Q9Y2B4 290 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
USP3-205ENST00000557884 ATP6AP2A0A1C7CYW4 349 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 A0A1W2PS29 197 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 SAGE2PA6NJ88 616 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 SNNO75324 88 aaPredicted RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 GUCY1B2O75343 617 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 ATP6AP2O75787 350 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 PDGFAP04085 211 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 RPL14P50914 215 aaKnown RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 PGDP52209 483 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 SLC26A5P58743 744 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 SERTAD2Q14140 314 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 LACTB2Q53H82 288 aaPredicted RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 PLAG1Q6DJT9 500 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 NOXRED1Q6NXP6 359 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 GALNT18Q6P9A2 607 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 RNF165Q6ZSG1 346 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 KIF2BQ8N4N8 673 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 SIRT6Q8N6T7 355 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 DNAJB14Q8TBM8 379 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 DYDC1Q8WWB3 177 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 PPWD1Q96BP3 646 aaKnown RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 C19orf60Q96EN9 201 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 C11orf24Q96F05 449 aaPredicted RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 WBP1Q96G27 269 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 DGAT2Q96PD7 388 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 FAIM2Q9BWQ8 316 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 ADAP2Q9NPF8 381 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 THAP1Q9NVV9 213 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 HEY2Q9UBP5 337 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 TUBD1Q9UJT1 453 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 DLGAP4Q9Y2H0 992 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.41□□□□□ -0.26
USP3-205ENST00000557884 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
USP3-205ENST00000557884 FAM208BQ5VWN6 2430 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 A8MUI8 341 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 LSM1O15116 133 aaKnown RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 OR10H2O60403 315 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 PEX11AO75192 247 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 GPR75O95800 540 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 ICAM2P13598 275 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 TNNI3P19429 210 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 PRPH2P23942 346 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 SOX8P57073 446 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 TRA2BP62995 288 aaKnown RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 ZNF763Q0D2J5 394 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 KIAA0040Q15053 153 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 ELAVL1Q15717 326 aaKnown RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 EXT1Q16394 746 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 ZNF750Q32MQ0 723 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 RFTN2Q52LD8 501 aaPredicted RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 SOWAHCQ53LP3 525 aaPredicted RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 XKR7Q5GH72 579 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 VWA5B1Q5TIE3 1220 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 FCRLBQ6BAA4 426 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 FAM180BQ6P0A1 224 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 ZNF552Q9H707 407 aaPredicted RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 KCNK13Q9HB14 408 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 INTS9Q9NV88 658 aaKnown RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 SIRT5Q9NXA8 310 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 PTGFRNQ9P2B2 879 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 CES1P1Q9UKY3 287 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
USP3-205ENST00000557884 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
USP3-205ENST00000557884 CFAP46Q8IYW2 2715 aa13.4□□□□□ -0.27
USP3-205ENST00000557884 C1orf226A1L170 272 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 C17orf105B2RV13 164 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 NPIPB8E9PQR5 432 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 ERAL1O75616 437 aaKnown RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 PRB1P04280 392 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 KITP10721 976 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 ALOX15P16050 662 aaPredicted RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 TACR1P25103 407 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 PIK3R1P27986 724 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 PTGER1P34995 402 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 STT3AP46977 705 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 XKP51811 444 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 IGLV3-21P80748 117 aaPredicted RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 PLIN5Q00G26 463 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 C2orf80Q0P641 193 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 COLEC12Q5KU26 742 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 AGAP7PQ5VUJ5 663 aa13.39□□□□□ -0.27
USP3-205ENST00000557884 B3GNTL1Q67FW5 361 aaPredicted RBP13.39□□□□□ -0.27
USP3-205ENST00000557884 SLC48A1Q6P1K1 146 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms