RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 A0A1B0GVT2 93 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ARHGEF35A5YM69 484 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SERINC4A6NH21 518 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 INAFM1C9JVW0 142 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 H3BTX0 84 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ZNF264O43296 627 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PAX4O43316 350 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SMAD6O43541 496 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 NARSO43776 548 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 C1QL1O75973 258 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SLITRK3O94933 977 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CHRNA1P02708 482 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ATP1B1P05026 303 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CAPN1P07384 714 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 IGHV4-31P0DP07 118 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PNMTP11086 282 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 DARSP14868 501 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 ITGA2P17301 1181 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 AMD1P17707 334 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 GPX3P22352 226 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CA4P22748 312 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CA6P23280 308 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ETV1P50549 477 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 DNA2P51530 1060 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CSTF1Q05048 431 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 SLC20A2Q08357 652 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LGALS3BPQ08380 585 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 MFGE8Q08431 387 aaPredicted RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 HERC3Q15034 1050 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ZRSR1Q15695 479 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 HLFQ16534 295 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CLPPQ16740 277 aaPredicted RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 PARP6Q2NL67 630 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 HKDC1Q2TB90 917 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LRIT3Q3SXY7 679 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LRRC37A5PQ49AS3 106 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PRAMEF5Q5TYX0 476 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PRAMEF6Q5VXH4 476 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 C8orf82Q6P1X6 216 aaPredicted RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 OLFML1Q6UWY5 402 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 GFRALQ6UXV0 394 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ZNF788Q6ZQV5 615 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LCNL1Q6ZST4 164 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SLC24A5Q71RS6 500 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 P4HA3Q7Z4N8 544 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 C17orf64Q86WR6 236 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 EFCAB13Q8IY85 973 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LRRC75A-AS1Q8N1F1 130 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PGBD5Q8N414 524 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 DNAJC22Q8N4W6 341 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CCDC185Q8N715 623 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 RBMXL3Q8N7X1 1067 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 OR7A2PQ8NGA2 310 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 OR9K2Q8NGE7 335 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 WDR36Q8NI36 951 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 RAB3IL1Q8TBN0 382 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SUSD6Q92537 303 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LARP4BQ92615 738 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 SLC35C1Q96A29 364 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 IGSF21Q96ID5 467 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 C4orf45Q96LM5 186 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 CASD1Q96PB1 797 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 NPY6RQ99463 290 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 OMDQ99983 421 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 RAB11FIP5Q9BXF6 653 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 DCLK3Q9C098 648 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 OR2B2Q9GZK3 357 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PRSS22Q9GZN4 317 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LAT2Q9GZY6 243 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 WWP1Q9H0M0 922 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 FAM49AQ9H0Q0 323 aaPredicted RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 RBM38Q9H0Z9 239 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 CPVLQ9H3G5 476 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 KAT8Q9H7Z6 458 aaKnown RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 EVA1AQ9H8M9 152 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 FKRPQ9H9S5 495 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 LPAR2Q9HBW0 351 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SGK2Q9HBY8 427 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 SDR39U1Q9NRG7 319 aaPredicted RBP3.43□□□□□ -1.86
TDP1-217ENST00000557782 SPATA7Q9P0W8 599 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PILRBQ9UKJ0 227 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 KCNS2Q9ULS6 477 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 TRAF3IP3Q9Y228 551 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 ZNF175Q9Y473 711 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 RNF123Q5XPI4 1314 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 PARD3Q8TEW0 1356 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 PIK3R4Q99570 1358 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 PPIAL4CA0A0B4J2A2 164 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 LOC101059948A0A1B0GTJ6 334 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 ASB14A6NK59 587 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 MEI4A8MW99 385 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 M0QX08 132 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 OVOL3O00110 214 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 DNALI1O14645 258 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 ARPC3O15145 178 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 CFLARO15519 480 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 XPNPEP2O43895 674 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms