RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ACSM2AQ08AH3 577 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 TERF2Q15554 542 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
PSEN1-223ENST00000557511 SPIN4Q56A73 249 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 SPDYAQ5MJ70 313 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 ACSM2BQ68CK6 577 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 LETMD1Q6P1Q0 360 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 IGFL3Q6UXB1 125 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 ZNF793Q6ZN11 406 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 FRMD7Q6ZUT3 714 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 RPS27LQ71UM5 84 aaKnown RBP7.8□□□□□ -1.16
PSEN1-223ENST00000557511 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 C10orf107Q8IVU9 208 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 TMEM151BQ8IW70 566 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 SCUBE1Q8IWY4 988 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 RNF175Q8N4F7 328 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 GOLGA6L1Q8N7Z2 621 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 B3GNT7Q8NFL0 401 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 TCP10LQ8TDR4 215 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 VMP1Q96GC9 406 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 IMMP1LQ96LU5 166 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 DGAT2Q96PD7 388 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 MAPKAP1Q9BPZ7 522 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 SORBS1Q9BX66 1292 aaKnown RBP7.8□□□□□ -1.16
PSEN1-223ENST00000557511 ALOXE3Q9BYJ1 711 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 AICDAQ9GZX7 198 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 DDX31Q9H8H2 851 aaKnown RBP7.8□□□□□ -1.16
PSEN1-223ENST00000557511 MMP25Q9NPA2 562 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 KCNK9Q9NPC2 374 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 NECTIN3Q9NQS3 549 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.8□□□□□ -1.16
PSEN1-223ENST00000557511 STMN3Q9NZ72 180 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 COPS7AQ9UBW8 275 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 EMCNQ9ULC0 261 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 GPC6Q9Y625 555 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-223ENST00000557511 CHD6Q8TD26 2715 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 ZFYVE26Q68DK2 2539 aa7.8□□□□□ -1.16
PSEN1-223ENST00000557511 ZFHX4Q86UP3 3567 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 MDC1Q14676 2089 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 SEC16AO15027 2179 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 TRAV17A0A0B4J275 112 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 GNG14A0A1W2PPG7 69 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 K7EM74 188 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 SLC28A1O00337 649 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 CYR61O00622 381 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 TM9SF1O15321 606 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 RGS14O43566 566 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 VPS4BO75351 444 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ZFAND5O76080 213 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 TBX6O95947 436 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 PDGFAP04085 211 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 UROSP10746 265 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 PIK3R1P27986 724 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 BSGP35613 385 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 SERPINB5P36952 375 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 TRA2BP62995 288 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 TLE1Q04724 770 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ZNF844Q08AG5 666 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 Q0VFX4 171 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ELOAQ14241 798 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ZNF169Q14929 603 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 NADK2Q4G0N4 442 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 OR52E8Q6IFG1 317 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 SH2D5Q6ZV89 423 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 NUDCD3Q8IVD9 361 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ALDH16A1Q8IZ83 802 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 LGI4Q8N135 537 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 FAM98AQ8NCA5 519 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 MORN4Q8NDC4 146 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 OR5L2Q8NGL0 311 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 OR14A16Q8NHC5 309 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 AGAP11Q8TF27 550 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 PKNOX2Q96KN3 472 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 C5orf34Q96MH7 638 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ZIM3Q96PE6 472 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 CSF3RQ99062 836 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 UTP23Q9BRU9 249 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 MRPL1Q9BYD6 325 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 GSTO2Q9H4Y5 243 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 SSU72Q9NP77 194 aaKnown RBP7.79□□□□□ -1.16
PSEN1-223ENST00000557511 AGPAT4Q9NRZ5 378 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 GIMAP4Q9NUV9 329 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 KCMF1Q9P0J7 381 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 VPS4AQ9UN37 437 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 ACTL7BQ9Y614 415 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 CACNA1GO43497 2377 aa7.79□□□□□ -1.16
PSEN1-223ENST00000557511 IGSF10Q6WRI0 2623 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 IGKV3D-11A0A0A0MRZ8 115 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 A0A0A6YYD5 115 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 TRBV11-1A0A0K0K1C0 115 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 C1orf226A1L170 272 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 OR5H15A6NDH6 313 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 C17orf105B2RV13 164 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 PPP6CO00743 305 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 AZIN1O14977 448 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 PROM1O43490 865 aa7.78□□□□□ -1.16
PSEN1-223ENST00000557511 PCDH7O60245 1069 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms