RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PPP1R21Q6ZMI0 780 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SCARA5Q6ZMJ2 495 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 Q7L0L9 218 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 TGIF2LYQ8IUE0 185 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SRSF12Q8WXF0 261 aaKnown RBP1.46□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF274Q96GC6 653 aaPredicted RBP1.46□□□□□ -2.18
FOXN3-216ENST00000557496 OR5M11Q96RB7 305 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SERINC2Q96SA4 455 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SLC25A23Q9BV35 468 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 DPEP3Q9H4B8 488 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SPG21Q9NZD8 308 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SNX7Q9UNH6 387 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 NEU3Q9UQ49 428 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 EXOC6BQ9Y2D4 811 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 CFAP65Q6ZU64 1925 aaKnown RBP1.46□□□□□ -2.18
FOXN3-216ENST00000557496 ZNFX1Q9P2E3 1918 aaKnown RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 A8MX80 341 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 ERVV-1B6SEH8 477 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 EMC8O43402 210 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 CSDE1O75534 798 aaKnown RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 PGLSO95336 258 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 SBK2P0C263 348 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 PSG2P11465 335 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 LBPP18428 481 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 PSMB4P28070 264 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 OR3A1P47881 315 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 TRPC1P48995 793 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 RPL27P61353 136 aaKnown RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 ODF2Q5BJF6 829 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 HYIQ5T013 277 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 TXNRD3NBQ6F5E7 133 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 TATDN1Q6P1N9 297 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 C11orf57Q6ZUT1 292 aaPredicted RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 MEX3DQ86XN8 651 aaKnown RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 H1FOOQ8IZA3 346 aaPredicted RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 FBXW8Q8N3Y1 598 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 Q8N9G6 341 aaPredicted RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 SAP25Q8TEE9 199 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 CRYGNQ8WXF5 182 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 PIWIL1Q96J94 861 aaKnown RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 SLC25A39Q9BZJ4 359 aaPredicted RBP1.45□□□□□ -2.18
FOXN3-216ENST00000557496 LMAN1LQ9HAT1 526 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 IL1RL2Q9HB29 575 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 TIGARQ9NQ88 270 aa1.45□□□□□ -2.18
FOXN3-216ENST00000557496 CCDC162PA2VCL2 907 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 CCSO14618 274 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 CLN5O75503 358 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 WISP3O95389 354 aaPredicted RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 RPS2P15880 293 aaKnown RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 HNRNPA2B1P22626 353 aaKnown RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 PAX3P23760 479 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF33BQ06732 778 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 TEFQ10587 303 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 CETN1Q12798 172 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ASAH1Q13510 395 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 SLC10A1Q14973 349 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 EMC2Q15006 297 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 IL17AQ16552 155 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 HYAL4Q2M3T9 481 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 IQCCQ4KMZ1 466 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF658Q5TYW1 1059 aaPredicted RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 FAM219BQ5XKK7 198 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF561Q8N587 486 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 GVQW1Q8N7I0 195 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 TPRX1Q8N7U7 411 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 SMYD1Q8NB12 490 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 RNF149Q8NC42 400 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 SEPT8Q92599 483 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 SNRNP40Q96DI7 357 aaKnown RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 STARD4Q96DR4 205 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ERGIC2Q96RQ1 377 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ST6GALNAC5Q9BVH7 336 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 NMUR2Q9GZQ4 415 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 UBA5Q9GZZ9 404 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF665Q9H7R5 613 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 ELL3Q9HB65 397 aaPredicted RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 PATZ1Q9HBE1 687 aaKnown RBP1.44□□□□□ -2.18
FOXN3-216ENST00000557496 PDRG1Q9NUG6 133 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 PRODH2Q9UF12 536 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 CCPG1Q9ULG6 757 aa1.44□□□□□ -2.18
FOXN3-216ENST00000557496 IGLV3-16A0A075B6K0 115 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 A0A1W2PQ67 120 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SYNDIG1LA6NDD5 238 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ANKDD1BA6NHY2 528 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SLC15A5A6NIM6 579 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 DFNA5O60443 496 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 CSO75390 466 aaKnown RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 CA11O75493 328 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 GRAP2O75791 330 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SERF1AO75920 110 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 STBD1O95210 358 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 OR6A2O95222 327 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ADRB2P07550 413 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SNRPCP09234 159 aaKnown RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ANKRD34CP0C6C1 535 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 IL11P20809 199 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 PPOXP50336 477 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ARHGDIAP52565 204 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 MFAP2P55001 183 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 MFGE8Q08431 387 aaPredicted RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms