RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CD300LDQ6UXZ3 194 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 TMPRSS11BQ86T26 416 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 PEX5LQ8IYB4 626 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 OR7G1Q8NGA0 311 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 CREB3L4Q8TEY5 395 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 BHMTQ93088 406 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 NEIL2Q969S2 332 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 RNF170Q96K19 258 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 FRMD6Q96NE9 622 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SAMD11Q96NU1 681 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 ZDHHC6Q9H6R6 413 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 TBX21Q9UL17 535 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 HCN2Q9UL51 889 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 KLHL20Q9Y2M5 609 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 PRRG1O14668 218 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 NPC1O15118 1278 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 HCN1O60741 890 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 TBX19O60806 448 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 GUCY1B2O75343 617 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 RECKO95980 971 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 H1F0P07305 194 aaKnown RBP15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SOAT1P35610 550 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 PRLHRP49683 370 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 GNG2P59768 71 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SLC7A9P82251 487 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 YIF1BQ5BJH7 314 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SYCE2Q6PIF2 218 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 GDPD4Q6W3E5 623 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 CCDC149Q6ZUS6 474 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 ARMCX6Q7L4S7 300 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 TCTE3Q8IZS6 198 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 IL4I1Q96RQ9 567 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 TSSK6Q9BXA6 273 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
SHMT2-232ENST00000557487 C11orf16Q9NQ32 467 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 PRKAG2Q9UGJ0 569 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 KLHL21Q9UJP4 597 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 MAU2Q9Y6X3 613 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 TRBV4-1A0A0J9YWV2 114 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 FABP12A6NFH5 140 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 H3BM21 787 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 RAB36O95755 333 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 MYL9P24844 172 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 ELAVL4P26378 380 aaKnown RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 ERP29P30040 261 aaKnown RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 DGKGP49619 791 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 RAB33AQ14088 237 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 MPEG1Q2M385 716 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF284Q2VY69 593 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 KLHL22Q53GT1 634 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 HENMT1Q5T8I9 393 aaKnown RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 METAP1DQ6UB28 335 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 DPY19L3Q6ZPD9 716 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 TCEAL8Q8IYN2 117 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 CACTIN-AS1Q8N1I8 211 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 VANGL1Q8TAA9 524 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 CIDECQ96AQ7 238 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 TRIM43Q96BQ3 446 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 NEURL3Q96EH8 262 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 IGSF21Q96ID5 467 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 RNF121Q9H920 327 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 TXNL4BQ9NX01 149 aaKnown RBP15.5■□□□□ 0.07
SHMT2-232ENST00000557487 ACSL6Q9UKU0 697 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 ACAD8Q9UKU7 415 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 SNX11Q9Y5W9 270 aa15.5■□□□□ 0.07
SHMT2-232ENST00000557487 COL4A6Q14031 1691 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 PIPSLA2A3N6 862 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 SNTNA6NMZ2 147 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 AP3D1O14617 1153 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 FFAR1O14842 300 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 PROM1O43490 865 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 MTX2O75431 263 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CYP7B1O75881 506 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CDRT1O95170 752 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 SOD2P04179 222 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 HBQ1P09105 142 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CKMT1AP12532 417 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CPN2P22792 545 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 BDKRB1P46663 353 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TAS2R50P59544 299 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 SLBPQ14493 270 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 PUM1Q14671 1186 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 QPRTQ15274 297 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 DUSP6Q16828 381 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 C3orf38Q5JPI3 329 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 SAXO2Q658L1 398 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ADNP2Q6IQ32 1131 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 OTOP2Q7RTS6 562 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 OR5P2Q8WZ92 322 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ZC3HAV1LQ96H79 300 aaKnown RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 KCTD7Q96MP8 289 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 SGPP1Q9BX95 441 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 EPHX3Q9H6B9 360 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ANKRA2Q9H9E1 313 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 MRPL17Q9NRX2 175 aaKnown RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TMEM39AQ9NV64 488 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 MRPS18AQ9NVS2 196 aaKnown RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 AHSPQ9NZD4 102 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 DNAJC27Q9NZQ0 273 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms