RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 FAM13CQ8NE31 585 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 TNIP2Q8NFZ5 429 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 KIAA1191Q96A73 305 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 SARAFQ96BY9 339 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 GAL3ST4Q96RP7 486 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 MS4A8Q9BY19 250 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-210ENST00000557431 NT5DC2Q9H857 520 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 VPS13CQ709C8 3753 aa12.98□□□□□ -0.33
SLIRP-210ENST00000557431 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
SLIRP-210ENST00000557431 CXorf49A8MYA2 514 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-210ENST00000557431 WISP3O95389 354 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-210ENST00000557431 BMP5P22003 454 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 CPN2P22792 545 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 AGFG1P52594 562 aaKnown RBP12.97□□□□□ -0.33
SLIRP-210ENST00000557431 PPP2R2AP63151 447 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 KCNJ2P63252 427 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 CHIT1Q13231 466 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 ZNF791Q3KP31 576 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-210ENST00000557431 PIGGQ5H8A4 983 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 C18orf63Q68DL7 685 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 BICRALQ6AI39 1079 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 OR10G3Q8NGC4 313 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 UCN3Q969E3 161 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 RMND5BQ96G75 393 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-210ENST00000557431 DGAT2Q96PD7 388 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 SMR3AQ99954 134 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 OR51B5Q9H339 312 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 RASSF1Q9NS23 344 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 IGSF5Q9NSI5 407 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 GPRC5BQ9NZH0 403 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 CD274Q9NZQ7 290 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 COPS7AQ9UBW8 275 aa12.97□□□□□ -0.33
SLIRP-210ENST00000557431 A0A1W2PS29 197 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SUSD5O60279 629 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 CCDC166P0CW27 439 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 CD1DP15813 335 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 TACR1P25103 407 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SSR2P43308 183 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 KCNC1P48547 511 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 HNRNPH2P55795 449 aaKnown RBP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 HERVK_113P63132 956 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 ERVK-8P63133 956 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 DDX39BQ13838 428 aaKnown RBP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 MORF4L2Q15014 288 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 EFTUD2Q15029 972 aaKnown RBP eCLIP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 PDK4Q16654 411 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 HYAL4Q2M3T9 481 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 RIPPLY2Q5TAB7 128 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SLC22A10Q63ZE4 541 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 GPSM1Q86YR5 675 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 ULK2Q8IYT8 1036 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 OR8K3Q8NH51 312 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 ZNF473Q8WTR7 871 aaKnown RBP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 ANKRD7Q92527 254 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SPACA9Q96E40 222 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 PTCD3Q96EY7 689 aaKnown RBP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SENP5Q96HI0 755 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SGCZQ96LD1 299 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 KCNC2Q96PR1 638 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SH3GL2Q99962 352 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 ERVK-6Q9BXR3 956 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 DERL2Q9GZP9 239 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 RHOJQ9H4E5 214 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SH2D2AQ9NP31 389 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 CBLCQ9ULV8 474 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 ERVK-19Q9WJR5 959 aa12.96□□□□□ -0.33
SLIRP-210ENST00000557431 C15orf38-AP3S2A0A0A6YYH1 394 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 TP73O15350 636 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 STK16O75716 305 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 IGKV3-11P04433 115 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-210ENST00000557431 DNASE1P24855 282 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 GDF1P27539 372 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 GSTM2P28161 218 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 STT3AP46977 705 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 SLC12A2P55011 1212 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 ARL4CP56559 192 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 IRF8Q02556 426 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 SERTAD2Q14140 314 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 RCN2Q14257 317 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 CHDHQ8NE62 594 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-210ENST00000557431 SLC22A8Q8TCC7 542 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 PAQR8Q8TEZ7 354 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 NINJ1Q92982 152 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 KRT12Q99456 494 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 MCMBPQ9BTE3 642 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 LYRM4Q9HD34 91 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 MOCS1Q9NZB8 636 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 SLC6A5Q9Y345 797 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 CHCHD2Q9Y6H1 151 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-210ENST00000557431 ARID1AO14497 2285 aa12.95□□□□□ -0.34
SLIRP-210ENST00000557431 GLOD5A6NK44 160 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 A6NNC1 897 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms