RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 DEFB126Q9BYW3 111 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 CENPHQ9H3R5 247 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 CDCP1Q9H5V8 836 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 PLA2G3Q9NZ20 509 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 LUZP4Q9P127 313 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 ACTL7BQ9Y614 415 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 BOD1L1Q8NFC6 3051 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 TRBV11-1A0A0K0K1C0 115 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 C1orf226A1L170 272 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 C17orf105B2RV13 164 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 FCHO1O14526 889 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ZFAND5O76080 213 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 GPR75O95800 540 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ALOX15P16050 662 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 CREB1P16220 341 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 PIK3R1P27986 724 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 GALNSP34059 522 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 SERPINB5P36952 375 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 GSTM5P46439 218 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 HTR6P50406 440 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 TNFSF10P50591 281 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 GPR143P51810 404 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 FOXA1P55317 472 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ID2Q02363 134 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ACSM2AQ08AH3 577 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 IMPG1Q17R60 797 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 TNFAIP8L3Q5GJ75 292 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 BEND6Q5SZJ8 279 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 NDUFAF5Q5TEU4 345 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ACSM2BQ68CK6 577 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 FCRLBQ6BAA4 426 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 RPUSD3Q6P087 351 aaKnown RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 EXOC3L1Q86VI1 746 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ATCAYQ86WG3 371 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 OR4N5Q8IXE1 308 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ST13P4Q8IZP2 240 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 BEST3Q8N1M1 668 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 KIF2BQ8N4N8 673 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 C1orf52Q8N6N3 182 aaKnown RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 HORMAD2Q8N7B1 307 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 AMER2Q8N7J2 671 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 PTPMT1Q8WUK0 201 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 NCLNQ969V3 563 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ART5Q96L15 291 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 UTP23Q9BRU9 249 aaKnown RBP11.65□□□□□ -0.54
SLIRP-209ENST00000557342 FAIM2Q9BWQ8 316 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 COPS7AQ9UBW8 275 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 PCDHGA10Q9Y5H3 936 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 CSAG2Q9Y5P2 127 aa11.65□□□□□ -0.54
SLIRP-209ENST00000557342 MYOCOSA0A1B0GUC4 107 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 GOLGA6L10A6NI86 522 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 GABRR3A8MPY1 467 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 AZIN1O14977 448 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 TM9SF1O15321 606 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 OR10H2O60403 315 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 PRKRAO75569 313 aaKnown RBP11.64□□□□□ -0.55
SLIRP-209ENST00000557342 WISP1O95388 367 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 CHEK2O96017 543 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 BPGMP07738 259 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 CHN1P15882 459 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 H2AFXP16104 143 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-209ENST00000557342 MLF1P58340 268 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 FOXK1P85037 733 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 INAQ16352 499 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 SPDYAQ5MJ70 313 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 HSDL2Q6YN16 418 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 TRIM46Q7Z4K8 759 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 ARMC10Q8N2F6 343 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 OR4K14Q8NGD5 310 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 OR1N1Q8NGS0 311 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 OR8K3Q8NH51 312 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 SLC2A12Q8TD20 617 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 MIB2Q96AX9 1013 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 TM4SF18Q96CE8 201 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 METTL2AQ96IZ6 378 aaKnown RBP11.64□□□□□ -0.55
SLIRP-209ENST00000557342 NPAS2Q99743 824 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 MECRQ9BV79 373 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 OR8D2Q9GZM6 311 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.64□□□□□ -0.55
SLIRP-209ENST00000557342 SIRT5Q9NXA8 310 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-209ENST00000557342 MAP10Q9P2G4 905 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 PSME2Q9UL46 239 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 PCDHA9Q9Y5H5 950 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 COPG1Q9Y678 874 aaKnown RBP11.64□□□□□ -0.55
SLIRP-209ENST00000557342 KALRNO60229 2985 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 SPTA1P02549 2419 aa11.64□□□□□ -0.55
SLIRP-209ENST00000557342 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
SLIRP-209ENST00000557342 SHANK1Q9Y566 2161 aa11.63□□□□□ -0.55
SLIRP-209ENST00000557342 GNG14A0A1W2PPG7 69 aa11.63□□□□□ -0.55
SLIRP-209ENST00000557342 GLOD5A6NK44 160 aa11.63□□□□□ -0.55
SLIRP-209ENST00000557342 SLC28A1O00337 649 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms