RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 UBE3DQ7Z6J8 389 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 ZFAND4Q86XD8 727 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 PROSER1Q86XN7 944 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 PTRH1Q86Y79 214 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 NAXDQ8IW45 347 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 TRIM48Q8IWZ4 208 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SLC35F3Q8IY50 421 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 ADGRF4Q8IZF3 695 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MCOLN2Q8IZK6 566 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SPAG16Q8N0X2 631 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 LCORLQ8N3X6 602 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 DNAJC22Q8N4W6 341 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MINDY1Q8N5J2 469 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MS4A15Q8N5U1 240 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 TRAM1L1Q8N609 369 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 C1orf52Q8N6N3 182 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 NANOGP1Q8N7R0 232 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 GLIS1Q8NBF1 620 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 UXS1Q8NBZ7 420 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 FAM156AQ8NDB6 213 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MCPH1Q8NEM0 835 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 OR2L5Q8NG80 312 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SPATA22Q8NHS9 363 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 CYP2W1Q8TAV3 490 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SLC35B2Q8TB61 432 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 BPIFB1Q8TDL5 484 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 TCEAL4Q96EI5 215 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 LRRC46Q96FV0 321 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 FUBP3Q96I24 572 aaKnown RBP eCLIP4.4□□□□□ -1.719e-8■■□□□ 14.1
HNRNPC-229ENST00000557157 ZBED3Q96IU2 234 aaPredicted RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 NPAS2Q99743 824 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 ZNF559Q9BR84 538 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MARVELD1Q9BSK0 173 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 DPH7Q9BTV6 452 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 CRB3Q9BUF7 120 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MS4A7Q9GZW8 240 aaPredicted RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 IL22Q9GZX6 179 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 OPN3Q9H1Y3 402 aaPredicted RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MED28Q9H204 178 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 RHBGQ9H310 441 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 TMPRSS5Q9H3S3 457 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 GORASP2Q9H8Y8 452 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 KANSL2Q9H9L4 492 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SPACA1Q9HBV2 294 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 MRPL47Q9HD33 250 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 RBFOX1Q9NWB1 397 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 C14orf119Q9NWQ9 140 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 COX16Q9P0S2 106 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 NOCTQ9UK39 431 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 NUDT5Q9UKK9 219 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 ADAM28Q9UKQ2 775 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 DNPEPQ9ULA0 475 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 EMCNQ9ULC0 261 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 SLC39A10Q9ULF5 831 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 CA5BQ9Y2D0 317 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 PLEKHA6Q9Y2H5 1048 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 PCDHA8Q9Y5H6 950 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 KLK4Q9Y5K2 254 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 R4GN57 208 aa4.4□□□□□ -1.71
HNRNPC-229ENST00000557157 TICRRQ7Z2Z1 1910 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 IQCMA0A1B0GVH7 501 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 A0A1W2PP18 115 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 TCRBV5S2A0A599 114 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 BCLAF3A2AJT9 711 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 PRAMEF27A3QJZ7 478 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 C7orf66A4D0T2 115 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 FAM149AA5PLN7 773 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 FAM74A7A6NL05 159 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 KCNU1A8MYU2 1149 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 UPK3BL1B0FP48 263 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 D6RAR5 112 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 UPK3BL2E5RIL1 263 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 TEX46H3BTG2 121 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 ARNTLO00327 626 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 PRRG2O14669 202 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 ARPC2O15144 300 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 PMM2O15305 246 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 EIF3DO15371 548 aaKnown RBP eCLIP4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 TOX3O15405 576 aaPredicted RBP4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 FABP7O15540 132 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 SMAD6O43541 496 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 CHP2O43745 196 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 HPGDSO60760 199 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 TRIM13O60858 407 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 CBR3O75828 277 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 GADD45GO95257 159 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 CBX7O95931 251 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 EOMESO95936 686 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 APOC3P02656 99 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 C9P02748 559 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 MT-ND2P03891 347 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 QDPRP09417 244 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 OR4E1P0C645 316 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 UQCRFS1P1P0C7P4 283 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 CBSLP0DN79 551 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 MLNP12872 115 aa4.39□□□□□ -1.71
HNRNPC-229ENST00000557157 RNH1P13489 461 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms