RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KRT33BQ14525 404 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 KIAA0040Q15053 153 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 CYP2A13Q16696 494 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 THEMIS2Q5TEJ8 643 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ANXA8L1Q5VT79 327 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 IRAK1BP1Q5VVH5 260 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ATG9BQ674R7 924 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ACSM2BQ68CK6 577 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 GRHL2Q6ISB3 625 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 NANOGP8Q6NSW7 305 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 NOXRED1Q6NXP6 359 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DOK6Q6PKX4 331 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DLEU7Q6UYE1 221 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 MSANTD1Q6ZTZ1 278 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 C11orf96Q7Z7L8 435 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DHDDSQ86SQ9 333 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TRIM74Q86UV6 250 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 HEATR4Q86WZ0 1026 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 HORMAD1Q86X24 394 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DCUN1D3Q8IWE4 304 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D21Q8IYX1 336 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 KRT78Q8N1N4 520 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PQLC1Q8N2U9 271 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 LIX1Q8N485 282 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 RNF148Q8N7C7 305 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 OR7G3Q8NG95 312 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 OR8J3Q8NGG0 315 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 OR2T34Q8NGX1 318 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DNAJB14Q8TBM8 379 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SCARB1Q8WTV0 552 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ZNF480Q8WV37 535 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 NRG4Q8WWG1 115 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SLC13A3Q8WWT9 602 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PYDC1Q8WXC3 89 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SMPDL3AQ92484 453 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TMEM125Q96AQ2 219 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SH3KBP1Q96B97 665 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TESCQ96BS2 214 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 RNF31Q96EP0 1072 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SIPA1Q96FS4 1042 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ITCHQ96J02 903 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TEX37Q96LM6 180 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 OR52E6Q96RD3 313 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 UHRF1Q96T88 793 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ZNF184Q99676 751 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 KCTD14Q9BQ13 255 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ECSITQ9BQ95 431 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TIMM29Q9BSF4 260 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 THUMPD3Q9BV44 507 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ACPTQ9BZG2 426 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 OR52A5Q9H2C5 316 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 VCXQ9H320 206 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 CLMPQ9H6B4 373 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 MVB12BQ9H7P6 319 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 NANOGQ9H9S0 305 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SGK2Q9HBY8 427 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 CCDC177Q9NQR7 707 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 BATF3Q9NR55 127 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 MBNL1Q9NR56 388 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 FARSBQ9NSD9 589 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 CCM2LQ9NUG4 571 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ARMC1Q9NVT9 282 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ASB6Q9NWX5 421 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 CMTM6Q9NX76 183 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 AHSPQ9NZD4 102 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ACTR3BQ9P1U1 418 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ABCD2Q9UBJ2 740 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PRSS50Q9UI38 385 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PSMD13Q9UNM6 376 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 RUVBL1Q9Y265 456 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ASF1AQ9Y294 204 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SLC17A4Q9Y2C5 497 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PTPRDP23468 1912 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DNAH14Q0VDD8 3507 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SCN5AQ14524 2016 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 CHD6Q8TD26 2715 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 A0A096LPI6 279 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PRSS51A0A1B0GVH4 220 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TCRBV3S1A0A5B6 114 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 EVPLLA8MZ36 301 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 E7EQ34 232 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 NME4O00746 187 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FPGTO14772 594 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CASQ2O14958 399 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 SORBS2O94875 1100 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 SCELO95171 688 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 APBB3O95704 486 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 EGFP01133 1207 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 GPIP06744 558 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 ANXA4P09525 319 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 PCNAP12004 261 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FCGR1AP12314 374 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 AMD1P17707 334 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 DDX5P17844 614 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 HRH2P25021 359 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 HTR1BP28222 390 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 NDUFS1P28331 727 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 HTR1EP28566 365 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms