RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF75CPQ92670 426 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-225ENST00000556798 TANKQ92844 425 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 C19orf60Q96EN9 201 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 ABHD17AQ96GS6 310 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 THOC3Q96J01 351 aaKnown RBP16.37■□□□□ 0.21
SHMT2-225ENST00000556798 BBC3Q96PG8 261 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-225ENST00000556798 NUDT9Q9BW91 350 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 INTS9Q9NV88 658 aaKnown RBP16.37■□□□□ 0.21
SHMT2-225ENST00000556798 SIRT5Q9NXA8 310 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 GPR83Q9NYM4 423 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 HEY2Q9UBP5 337 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 MARCOQ9UEW3 520 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-225ENST00000556798 HAO1Q9UJM8 370 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 DLGAP4Q9Y2H0 992 aa16.37■□□□□ 0.21
SHMT2-225ENST00000556798 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-225ENST00000556798 A0A1W2PS29 197 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 SAGE2PA6NJ88 616 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 NPIPB8E9PQR5 432 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 MKRN2OSH3BPM6 223 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 K7EM74 188 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 GUCY1B2O75343 617 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 CEACAM4O75871 244 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 SNUPNO95149 360 aaKnown RBP16.36■□□□□ 0.21
SHMT2-225ENST00000556798 PRR35P0CG20 571 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 SLC26A5P58743 744 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 TRA2BP62995 288 aaKnown RBP16.36■□□□□ 0.21
SHMT2-225ENST00000556798 IGLV3-21P80748 117 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-225ENST00000556798 OCRLQ01968 901 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 RFTN2Q52LD8 501 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-225ENST00000556798 KBTBD2Q8IY47 623 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 DNAJB14Q8TBM8 379 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 SLC25A23Q9BV35 468 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 SEMA4CQ9C0C4 833 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 ADAP2Q9NPF8 381 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 PCDHA9Q9Y5H5 950 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 BOD1L1Q8NFC6 3051 aa16.36■□□□□ 0.21
SHMT2-225ENST00000556798 C1orf226A1L170 272 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 ATXN7O15265 892 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-225ENST00000556798 PEX11AO75192 247 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 GPR75O95800 540 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 PDGFAP04085 211 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 SERPINA7P05543 415 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 KITP10721 976 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 ITGAMP11215 1152 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 TACR1P25103 407 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 ZNF763Q0D2J5 394 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 SERTAD2Q14140 314 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 MYBPC3Q14896 1274 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 HSP90B2PQ58FF3 399 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 PLAG1Q6DJT9 500 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 FAM180BQ6P0A1 224 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 HOMEZQ8IX15 550 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 BRIX1Q8TDN6 353 aaKnown RBP16.35■□□□□ 0.21
SHMT2-225ENST00000556798 LRRC8CQ8TDW0 803 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 DOK4Q8TEW6 326 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 PPWD1Q96BP3 646 aaKnown RBP16.35■□□□□ 0.21
SHMT2-225ENST00000556798 TUBGCP3Q96CW5 907 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 FAIM2Q9BWQ8 316 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 NUF2Q9BZD4 464 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 LHPPQ9H008 270 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 ADNPQ9H2P0 1102 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 ZNF71Q9NQZ8 489 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-225ENST00000556798 VTI1BQ9UEU0 232 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 TP53TG5Q9Y2B4 290 aa16.35■□□□□ 0.21
SHMT2-225ENST00000556798 TLN1Q9Y490 2541 aaKnown RBP16.34■□□□□ 0.21
SHMT2-225ENST00000556798 KLF11O14901 512 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 TNNI3P19429 210 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 PIK3R1P27986 724 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 HK2P52789 917 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 SOX8P57073 446 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 ELAVL1Q15717 326 aaKnown RBP16.34■□□□□ 0.21
SHMT2-225ENST00000556798 EXT1Q16394 746 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 ZNF750Q32MQ0 723 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 ATP6AP1LQ52LC2 224 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 IRAK1BP1Q5VVH5 260 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 SLC48A1Q6P1K1 146 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 DGAT2L6Q6ZPD8 337 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 KIF2BQ8N4N8 673 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 SIRT6Q8N6T7 355 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 NFAM1Q8NET5 270 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-225ENST00000556798 CLHC1Q8NHS4 586 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 C9orf43Q8TAL5 461 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-225ENST00000556798 FAM76AQ8TAV0 307 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 KLHL29Q96CT2 875 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 METTL2AQ96IZ6 378 aaKnown RBP16.34■□□□□ 0.21
SHMT2-225ENST00000556798 FCRL1Q96LA6 429 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 PPP3R2Q96LZ3 170 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 DGAT2Q96PD7 388 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 C1orf50Q9BV19 199 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 MYNNQ9NPC7 610 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 CES1P1Q9UKY3 287 aa16.34■□□□□ 0.21
SHMT2-225ENST00000556798 PCDHGA9Q9Y5G4 932 aaKnown RBP16.34■□□□□ 0.21
SHMT2-225ENST00000556798 C17orf105B2RV13 164 aa16.33■□□□□ 0.2
SHMT2-225ENST00000556798 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
SHMT2-225ENST00000556798 ERAL1O75616 437 aaKnown RBP16.33■□□□□ 0.2
SHMT2-225ENST00000556798 ALOX15P16050 662 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-225ENST00000556798 SDC1P18827 310 aa16.33■□□□□ 0.2
SHMT2-225ENST00000556798 STT3AP46977 705 aa16.33■□□□□ 0.2
SHMT2-225ENST00000556798 PGDP52209 483 aa16.33■□□□□ 0.2
SHMT2-225ENST00000556798 PLIN5Q00G26 463 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms