RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OR4F6Q8NGB9 312 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 OR56A4Q8NGH8 313 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 NR4A3Q92570 626 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 FOXJ1Q92949 421 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TNFRSF14Q92956 283 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SPACA9Q96E40 222 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 MRGPRX3Q96LB0 322 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 LRRC3BQ96PB8 259 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 C1orf50Q9BV19 199 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GRIP2Q9C0E4 1043 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 OR10A4Q9H209 315 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IL1RAPQ9NPH3 570 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PRDM9Q9NQV7 894 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 KLHL1Q9NR64 748 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IL19Q9UHD0 177 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ZNHIT2Q9UHR6 403 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 C3orf18Q9UK00 162 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GPR55Q9Y2T6 319 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PCM1Q15154 2024 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 DOCK8Q8NF50 2099 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TEX13CA0A0J9YWL9 993 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 AKR7A2O43488 359 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 BNIP3LO60238 219 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SEC22BO75396 215 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SLC22A3O75751 556 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RSL1D1O76021 490 aaKnown RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CLPXO76031 633 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TGM6O95932 706 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 UGT2B4P06133 528 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RHOP08100 348 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SLC2A1P11166 492 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PIM1P11309 404 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PSKH1P11801 424 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TYRP14679 529 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CCR7P32248 378 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 HSPA7P48741 367 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PPP5CP53041 499 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GTF2H2Q13888 395 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GBX1Q14549 363 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ABRAXAS2Q15018 415 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TRAM2Q15035 370 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CARTPTQ16568 116 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RBBP7Q16576 425 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 OCLNQ16625 522 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GPR33Q49SQ1 333 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 YIF1BQ5BJH7 314 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 COQ5Q5HYK3 327 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PDSS1Q5T2R2 415 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GTF2H2CQ6P1K8 395 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 VHLLQ6RSH7 139 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SMIM15Q7Z3B0 74 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM126BQ8IUX1 230 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ERI1Q8IV48 349 aaKnown RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ZBTB2Q8N680 514 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 SNX33Q8WV41 574 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IRF7Q92985 503 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RHBDF1Q96CC6 855 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 DUS3LQ96G46 650 aaKnown RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 DCUN1D1Q96GG9 259 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 REXO4Q9GZR2 422 aaKnown RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PPA2Q9H2U2 334 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ZDHHC6Q9H6R6 413 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CERS4Q9HA82 394 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 C19orf12Q9NSK7 152 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 B4GALT6Q9UBX8 382 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IL20RAQ9UHF4 553 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ENPP5Q9UJA9 477 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 INSL6Q9Y581 213 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PCDHA9Q9Y5H5 950 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 HRH3Q9Y5N1 445 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 A0A1W2PP18 115 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 WBP4O75554 376 aaKnown RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CTSLP07711 333 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 UQCRBP14927 111 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 EPCAMP16422 314 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF26P17031 533 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PTAFRP25105 342 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 UQCRC1P31930 480 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 MPIP34949 423 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 NSG1P42857 185 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IFITM2Q01629 132 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CREB5Q02930 508 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 MESP2Q0VG99 397 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 GRIK2Q13002 908 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RPA4Q13156 261 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CLN3Q13286 438 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 DDX39BQ13838 428 aaKnown RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 ZNHIT3Q15649 155 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 RFTN2Q52LD8 501 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-210ENST00000556422 BEX5Q5H9J7 111 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 LY6G5CQ5SRR4 150 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 PERM1Q5SV97 790 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 CYP2R1Q6VVX0 501 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 IQCHQ86VS3 1027 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 VRK3Q8IV63 474 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 OR8J2Q8NGG1 315 aa4.87□□□□□ -1.63
TMEM260-210ENST00000556422 THAP3Q8WTV1 239 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms