RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SLC18A2Q05940 514 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 IFFO1Q0D2I5 559 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TUBA3CQ13748 450 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ERCC6LQ2NKX8 1250 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 SGO1Q5FBB7 561 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TUBA3EQ6PEY2 450 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 CYP20A1Q6UW02 462 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 FAM180AQ6UWF9 173 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 PAGE2Q7Z2X7 111 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 RPS19BP1Q86WX3 136 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 C4orf33Q8N1A6 199 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 MREGQ8N565 214 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 CDYL2Q8N8U2 506 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 OR14A16Q8NHC5 309 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 SUN3Q8TAQ9 357 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TANKQ92844 425 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 DAZLQ92904 295 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 NCLNQ969V3 563 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ANKRD9Q96BM1 317 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 MTFMTQ96DP5 389 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 APOPT1Q96IL0 206 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 UTP23Q9BRU9 249 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 MRPL1Q9BYD6 325 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ALOXE3Q9BYJ1 711 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 DEFB126Q9BYW3 111 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ROPN1BQ9BZX4 212 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 GSTO2Q9H4Y5 243 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 RPF2Q9H7B2 306 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ROPN1Q9HAT0 212 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 AGPAT4Q9NRZ5 378 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 FARSBQ9NSD9 589 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 AHSPQ9NZD4 102 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 MID2Q9UJV3 735 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ADAM29Q9UKF5 820 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ASB4Q9Y574 426 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 CLCA3PQ9Y6N3 262 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TCP11X1B4DZS4 312 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 MANBAO00462 879 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 SIAH2O43255 324 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PROM1O43490 865 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 ESRRBO95718 433 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 AIFM1O95831 613 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PDYNP01213 254 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 COX7A2P14406 83 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 GNLYP22749 145 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 HMOX2P30519 316 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 STT3AP46977 705 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 GPR143P51810 404 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 MLF1P58340 268 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 DNAJB13P59910 316 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PLIN5Q00G26 463 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 ID2Q02363 134 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 CSTF3Q12996 717 aaKnown RBP10.75□□□□□ -0.69
SLIRP-205ENST00000556310 BIKQ13323 160 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 TCHHL1Q5QJ38 904 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-205ENST00000556310 C18orf63Q68DL7 685 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 OR52E8Q6IFG1 317 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 FRMD7Q6ZUT3 714 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 COMMD6Q7Z4G1 85 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 TRABD2AQ86V40 505 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 METTL4Q8N3J2 472 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 CCDC63Q8NA47 563 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 MORN4Q8NDC4 146 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 MDS2Q8NDY4 140 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 GRHL3Q8TE85 626 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 AGAP11Q8TF27 550 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PTPMT1Q8WUK0 201 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-205ENST00000556310 UCN2Q96RP3 112 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PELOQ9BRX2 385 aaKnown RBP10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 CDCP1Q9H5V8 836 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 WDR41Q9HAD4 459 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 NMRK1Q9NWW6 199 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 ZNF223Q9UK11 482 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-205ENST00000556310 RAB21Q9UL25 225 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 SLC12A4Q9UP95 1085 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 PCDHGB6Q9Y5F9 930 aa10.75□□□□□ -0.69
SLIRP-205ENST00000556310 POLEQ07864 2286 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 SETXQ7Z333 2677 aaKnown RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 SPTAN1Q13813 2472 aaKnown RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 A0A1W2PR48 441 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 ARHGAP10A1A4S6 786 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 CLEC18AA5D8T8 446 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 CCDC151A5D8V7 595 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 C17orf105B2RV13 164 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 H3BQF6 201 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 FCHO1O14526 889 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 PRKRAO75569 313 aaKnown RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 DDAH2O95865 285 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 GBAP04062 536 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 TUBBP07437 444 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 CPA3P15088 417 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 TPP2P29144 1249 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 TRHRP34981 398 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 NAGLUP54802 743 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 FOLH1Q04609 750 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 GALNT1Q10472 559 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 TBL3Q12788 808 aaKnown RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 OR1C1Q15619 314 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms