RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 KCNMB2Q9Y691 235 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 UBR5O95071 2799 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CCDC88CQ9P219 2028 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 PTPRQQ9UMZ3 2332 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 LOC102723996A0A087X1L8 192 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 IQANK1A0A1B0GTG1 560 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 A0A1B0GX78 115 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NPEPPSL1A6NEC2 478 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 TRIM64A6NGJ6 449 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 C4orf51C9J302 202 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 H0YGG7 62 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 M0QX08 132 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NKX2-8O15522 239 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 IDH3BO43837 385 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 KERAO60938 352 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SNNO75324 88 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 RFPL1O75677 317 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ALX3O95076 343 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NTRK1P04629 796 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CYC1P08574 325 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 PRKCAP17252 672 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CD22P20273 847 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CYP2A7P20853 494 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 EPHA3P29320 983 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CMPK1P30085 196 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 DNAJA1P31689 397 aaKnown RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 IFNA8P32881 189 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 DLSTP36957 453 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 IST1P53990 364 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ARF3P61204 181 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 MRPS22P82650 360 aaKnown RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NFKB2Q00653 900 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 FOXM1Q08050 763 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NFATC3Q12968 1075 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 FAM53BQ14153 422 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 DEFB110Q30KQ9 67 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 C18orf21Q32NC0 220 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ADPRMQ3LIE5 342 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CDONQ4KMG0 1287 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CRB2Q5IJ48 1285 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 GARNL3Q5VVW2 1013 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 PRAMEF13Q5VWM6 474 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SLX4IPQ5VYV7 408 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ATG9BQ674R7 924 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 PPP4R4Q6NUP7 873 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 METTL2BQ6P1Q9 378 aaKnown RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 GALNT18Q6P9A2 607 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SLCO4C1Q6ZQN7 724 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 OVCH1Q7RTY7 1134 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 PALM2Q8IXS6 379 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 DTWD1Q8N5C7 304 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NATD1Q8N6N6 113 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 LSMEM1Q8N8F7 131 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ANKRD53Q8N9V6 530 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ANGPTL6Q8NI99 470 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 MCOLN3Q8TDD5 553 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ATL1Q8WXF7 558 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NEIL2Q969S2 332 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF347Q96SE7 839 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 MECRQ9BV79 373 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NPLQ9BXD5 320 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SLC6A16Q9GZN6 736 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 PITHD1Q9GZP4 211 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 RHBGQ9H310 441 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 RMND5AQ9H871 391 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 NANOGQ9H9S0 305 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 FANCEQ9HB96 536 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 MRPS30Q9NP92 439 aaKnown RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SNX15Q9NRS6 342 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ARMC1Q9NVT9 282 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 THAP1Q9NVV9 213 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 GPRC5BQ9NZH0 403 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 BCAP29Q9UHQ4 241 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SERTAD3Q9UJW9 196 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 TCFL5Q9UL49 500 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SLC39A10Q9ULF5 831 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 SNX7Q9UNH6 387 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 MRPS2Q9Y399 296 aaKnown RBP3.7□□□□□ -1.82
LINC00648-202ENST00000555985 ANGPTL3Q9Y5C1 460 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 CLDN16Q9Y5I7 305 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 IKBKGQ9Y6K9 419 aa3.7□□□□□ -1.82
LINC00648-202ENST00000555985 A0A087X1B8 175 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 TRBC2A0A5B9 178 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 FAM172BPA6NC97 362 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ZSCAN5BA6NJL1 495 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 OR2B3O76000 313 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CLPXO76031 633 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF182P17025 639 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SPRP35270 261 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 HPCAL1P37235 193 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ARSFP54793 590 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 P2RX3P56373 397 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 RPS15AP62244 130 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CYP4F2P78329 520 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 DCDP81605 110 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 IRF9Q00978 393 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PMS2P3Q13401 168 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF846Q147U1 533 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 RAB39AQ14964 217 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms