RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RAI1Q7Z5J4 1906 aaPredicted RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 IGHV3OR16-12A0A075B7B8 117 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 A0A0B4J203 849 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 EFCAB7A8K855 629 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 ERVV-1B6SEH8 477 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 GJB5O95377 273 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 PRAMEF12O95522 483 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 STARD3NLO95772 234 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 HSPB1P04792 205 aaKnown RBP1.69□□□□□ -2.14
SRP54-207ENST00000555535 SBK2P0C263 348 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 HSD17B1P14061 328 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 PPP5CP53041 499 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 PTENP60484 403 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 ABRQ12979 859 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 UGCGQ16739 394 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 C6orf136Q5SQH8 315 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 FAM219BQ5XKK7 198 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 ABI3BPQ7Z7G0 1075 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 PRPF39Q86UA1 669 aaKnown RBP1.69□□□□□ -2.14
SRP54-207ENST00000555535 LAX1Q8IWV1 398 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 TPRX1Q8N7U7 411 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 OR1K1Q8NGR3 316 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 OCC1Q8TAD7 63 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 SRSF12Q8WXF0 261 aaKnown RBP1.69□□□□□ -2.14
SRP54-207ENST00000555535 SNRNP40Q96DI7 357 aaKnown RBP1.69□□□□□ -2.14
SRP54-207ENST00000555535 RAB3CQ96E17 227 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 SIPA1Q96FS4 1042 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 TBX15Q96SF7 602 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 NAP1L4Q99733 375 aaKnown RBP1.69□□□□□ -2.14
SRP54-207ENST00000555535 TRIM7Q9C029 511 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 CUEDC2Q9H467 287 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 IMPAD1Q9NX62 359 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 SENP1Q9P0U3 644 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 CHD4Q14839 1912 aa1.69□□□□□ -2.14
SRP54-207ENST00000555535 C2orf92A0A1B0GVN3 265 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 A0A1W2PQ67 120 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 RNF212BA8MTL3 300 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 A8MX80 341 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 PDXKO00764 312 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 EMC8O43402 210 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 CSO75390 466 aaKnown RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 OR6A2O95222 327 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 GJB2P29033 226 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 PPP2R1BP30154 601 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 RPL27P61353 136 aaKnown RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 ZNF33BQ06732 778 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 AIMP1Q12904 312 aaKnown RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 ASAH1Q13510 395 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 ODF2Q5BJF6 829 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 HYIQ5T013 277 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 MEX3DQ86XN8 651 aaKnown RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 RNF175Q8N4F7 328 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 ARL14Q8N4G2 192 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 ZNF561Q8N587 486 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 C14orf178Q8N769 122 aaPredicted RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 Q8N9G6 341 aaPredicted RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 SMYD1Q8NB12 490 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 HEXDCQ8WVB3 486 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 SLC25A23Q9BV35 468 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 DPEP3Q9H4B8 488 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 ZNF665Q9H7R5 613 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 VIPAS39Q9H9C1 493 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 BCCIPQ9P287 314 aaKnown RBP eCLIP1.68□□□□□ -2.14
SRP54-207ENST00000555535 C5AR2Q9P296 337 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 PRODH2Q9UF12 536 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 SNX7Q9UNH6 387 aa1.68□□□□□ -2.14
SRP54-207ENST00000555535 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
SRP54-207ENST00000555535 CCDC162PA2VCL2 907 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 ANKDD1BA6NHY2 528 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 PGLSO95336 258 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 PSG2P11465 335 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 IL2RGP31785 369 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 TRPC1P48995 793 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 P2RY4P51582 365 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 LRRC63Q05C16 580 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 CETN1Q12798 172 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 ZNF273Q14593 569 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 SLC10A1Q14973 349 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 EMC2Q15006 297 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 IL17AQ16552 155 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 SGCBQ16585 318 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 MICAQ29983 383 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 AGBL2Q5U5Z8 902 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 LYPLAL1Q5VWZ2 237 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 SCARA5Q6ZMJ2 495 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 C11orf57Q6ZUT1 292 aaPredicted RBP1.67□□□□□ -2.14
SRP54-207ENST00000555535 ZNF433Q8N7K0 673 aaPredicted RBP1.67□□□□□ -2.14
SRP54-207ENST00000555535 KCTD6Q8NC69 237 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 CHDHQ8NE62 594 aaPredicted RBP1.67□□□□□ -2.14
SRP54-207ENST00000555535 OR6J1Q8NGC5 347 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 OR4F5Q8NH21 305 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 CRYGNQ8WXF5 182 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 MRPS27Q92552 414 aaKnown RBP1.67□□□□□ -2.14
SRP54-207ENST00000555535 SEPT8Q92599 483 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 IL22RA2Q969J5 263 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 PNPLA2Q96AD5 504 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 OR5M11Q96RB7 305 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 SERINC2Q96SA4 455 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 KIR2DL4Q99706 377 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms