RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 WDR41Q9HAD4 459 aa11□□□□□ -0.65
VRK1-204ENST00000555351 ZBTB26Q9HCK0 441 aa11□□□□□ -0.65
VRK1-204ENST00000555351 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
VRK1-204ENST00000555351 ZNF358Q9NW07 568 aa11□□□□□ -0.65
VRK1-204ENST00000555351 AHSPQ9NZD4 102 aa11□□□□□ -0.65
VRK1-204ENST00000555351 NFU1Q9UMS0 254 aa11□□□□□ -0.65
VRK1-204ENST00000555351 ATG4BQ9Y4P1 393 aa11□□□□□ -0.65
VRK1-204ENST00000555351 ASB4Q9Y574 426 aa11□□□□□ -0.65
VRK1-204ENST00000555351 KLF2Q9Y5W3 355 aaPredicted RBP11□□□□□ -0.65
VRK1-204ENST00000555351 ZGRF1Q86YA3 2104 aa11□□□□□ -0.65
VRK1-204ENST00000555351 NAV2Q8IVL1 2488 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 A8MVJ9 347 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 SAP18O00422 153 aaKnown RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 RIPK2O43353 540 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 PEX1O43933 1283 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 FGF17O60258 216 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 ZG16O60844 167 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 OR2J2O76002 312 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 GPR75O95800 540 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 IGKV3-11P04433 115 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 GSTA1P08263 222 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 FAM58BPP0C7Q3 252 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 NR2F6P10588 404 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 ALOX15P16050 662 aaPredicted RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 TAC1P20366 129 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 HK2P52789 917 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 HNRNPH2P55795 449 aaKnown RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 SRSF11Q05519 484 aaKnown RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 IFT88Q13099 833 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 TRAF3Q13114 568 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 XKRXQ6PP77 449 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 OPN5Q6U736 354 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 PAGE2Q7Z2X7 111 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 SPPL2CQ8IUH8 684 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 SULF2Q8IWU5 870 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 ZNF808Q8N4W9 903 aaPredicted RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 OR52B6Q8NGF0 335 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 TRPC4APQ8TEL6 797 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 ZNF721Q8TF20 911 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 ZNF483Q8TF39 744 aaPredicted RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 ASB15Q8WXK1 588 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 TRIM44Q96DX7 344 aaPredicted RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 PHF21BQ96EK2 531 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 SENP5Q96HI0 755 aaPredicted RBP10.99□□□□□ -0.65
VRK1-204ENST00000555351 DGAT2Q96PD7 388 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 RASL10BQ96S79 203 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 TXLNGYQ9BZA5 131 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 OR8D2Q9GZM6 311 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 BRF2Q9HAW0 419 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 HPF1Q9NWY4 346 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 ERVK-11Q9UQG0 969 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 STK38LQ9Y2H1 464 aa10.99□□□□□ -0.65
VRK1-204ENST00000555351 TRGV8A0A0C4DH27 118 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 IQANK1A0A1B0GTG1 560 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 OR6C76A6NM76 312 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 A8MT66 165 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 NPIPA5E9PKD4 350 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 CCL21O00585 134 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 PRKNO60260 465 aaPredicted RBP10.98□□□□□ -0.65
VRK1-204ENST00000555351 GUCY1B2O75343 617 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 ETHE1O95571 254 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 SBK3P0C264 359 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 SLC35E2P0CK97 266 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 GCAP28676 217 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 MEOX1P50221 254 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 HERVK_113P63132 956 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 FOLH1Q04609 750 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 OR52E8Q6IFG1 317 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 RTL4Q6ZR62 310 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 MDGA2Q7Z553 956 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 MILR1Q7Z6M3 343 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 RNF175Q8N4F7 328 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 CPSF7Q8N684 471 aaKnown RBP10.98□□□□□ -0.65
VRK1-204ENST00000555351 PSD4Q8NDX1 1056 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 PHF10Q8WUB8 498 aaKnown RBP10.98□□□□□ -0.65
VRK1-204ENST00000555351 ITLN2Q8WWU7 325 aaPredicted RBP10.98□□□□□ -0.65
VRK1-204ENST00000555351 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.98□□□□□ -0.65
VRK1-204ENST00000555351 CCDC120Q96HB5 630 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 SORBS1Q9BX66 1292 aaKnown RBP10.98□□□□□ -0.65
VRK1-204ENST00000555351 ERVK-6Q9BXR3 956 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 PPCSQ9HAB8 311 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 NMRK1Q9NWW6 199 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 TRPS1Q9UHF7 1281 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 NPIPA1Q9UND3 350 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 SNX6Q9UNH7 406 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 ENTPD4Q9Y227 616 aa10.98□□□□□ -0.65
VRK1-204ENST00000555351 A0A1W2PR48 441 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 TFECO14948 347 aaPredicted RBP10.97□□□□□ -0.65
VRK1-204ENST00000555351 TMPRSS11DO60235 418 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 SH3BGRLO75368 114 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 EEDO75530 441 aaKnown RBP10.97□□□□□ -0.65
VRK1-204ENST00000555351 OR6B1O95007 311 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 HSD3B1P14060 373 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 HSD3B2P26439 372 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 DCTP40126 519 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 ARL1P40616 181 aaPredicted RBP10.97□□□□□ -0.65
VRK1-204ENST00000555351 SOX3P41225 446 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 NEK2P51955 445 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 SMSP52788 366 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms