RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 METTL21AQ8WXB1 218 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 THAP4Q8WY91 577 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 MTERF3Q96E29 417 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ZNF681Q96N22 645 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 DCBLD2Q96PD2 775 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 TSSK3Q96PN8 268 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 C1orf50Q9BV19 199 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 RBCK1Q9BYM8 510 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 REEP4Q9H6H4 257 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 NPHS2Q9NP85 383 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 KLHL14Q9P2G3 628 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ADAM21Q9UKJ8 722 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 MAPRE3Q9UPY8 281 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 GPR45Q9Y5Y3 372 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 CELSR3Q9NYQ7 3312 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 GLOD5A6NK44 160 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 GABRR3A8MPY1 467 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 FGF17O60258 216 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 LDB3O75112 727 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 PRKRAO75569 313 aaKnown RBP11.89□□□□□ -0.51
SYNE2-219ENST00000555323 IDO1P14902 403 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 PRPS1L1P21108 318 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 MAOAP21397 527 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 ITPKBP27987 946 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 GALNSP34059 522 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 SEC24CP53992 1094 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 GNGT1P63211 74 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 SLC13A2Q13183 592 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 PTGR1Q14914 329 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 GSTA3Q16772 222 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 MFSD4BQ5TF39 518 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 BROXQ5VW32 411 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 CPZQ66K79 652 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 NXNQ6DKJ4 435 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 CCDC81Q6ZN84 652 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 RIPOR1Q6ZS17 1223 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 ANKRD37Q7Z713 158 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 SAMD14Q8IZD0 417 aaPredicted RBP11.89□□□□□ -0.51
SYNE2-219ENST00000555323 MMP21Q8N119 569 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 ZSCAN1Q8NBB4 408 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 OR4K14Q8NGD5 310 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 TSLPQ969D9 159 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 COQ8BQ96D53 544 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 VPS50Q96JG6 964 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 ALOXE3Q9BYJ1 711 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 BRINP2Q9C0B6 783 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 SDR39U1Q9NRG7 319 aaPredicted RBP11.89□□□□□ -0.51
SYNE2-219ENST00000555323 AIG1Q9NVV5 245 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 C19orf25Q9UFG5 118 aaPredicted RBP11.89□□□□□ -0.51
SYNE2-219ENST00000555323 ATP6V1HQ9UI12 483 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 DCTN4Q9UJW0 460 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 CCDC88CQ9P219 2028 aa11.89□□□□□ -0.51
SYNE2-219ENST00000555323 IGHV1-45A0A0A0MS14 117 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 UBDO15205 165 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 SHOX2O60902 331 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 SLC35E2P0CK97 266 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 PIK3R1P27986 724 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 RPL3P39023 403 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 STT3AP46977 705 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 XKP51811 444 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 ACTN3Q08043 901 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 STX4Q12846 297 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 TERF2Q15554 542 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 PRSS53Q2L4Q9 553 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 PDCD4Q53EL6 469 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 NDUFAF7Q7L592 441 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 R3HCC1LQ7Z5L2 792 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 CPEB2Q7Z5Q1 589 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 CAMKMTQ7Z624 323 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 MRGPREQ86SM8 312 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 OR4N5Q8IXE1 308 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 ST13P4Q8IZP2 240 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 NATD1Q8N6N6 113 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 OR11G2Q8NGC1 345 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 CNRIP1Q96F85 164 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 RBM18Q96H35 190 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 IMMP1LQ96LU5 166 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 WDR77Q9BQA1 342 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 ZNF700Q9H0M5 742 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 SLC35C2Q9NQQ7 365 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 TMEM45AQ9NWC5 275 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 P4HTMQ9NXG6 502 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 UTS2RQ9UKP6 389 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 ZMIZ1Q9ULJ6 1067 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 PPIEQ9UNP9 301 aaKnown RBP11.88□□□□□ -0.51
SYNE2-219ENST00000555323 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 CEP295Q9C0D2 2601 aa11.88□□□□□ -0.51
SYNE2-219ENST00000555323 A0A0G2JND7 137 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 MYO1GB0I1T2 1018 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 SCAMP2O15127 329 aaKnown RBP11.87□□□□□ -0.51
SYNE2-219ENST00000555323 ATP1B1P05026 303 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 COX6A1P12074 109 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 CPMP14384 443 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 PORP16435 677 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-219ENST00000555323 DDX5P17844 614 aaKnown RBP11.87□□□□□ -0.51
SYNE2-219ENST00000555323 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-219ENST00000555323 DRD4P21917 467 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 OTX2P32243 289 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 FRKP42685 505 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms