RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 LEUTXA8MZ59 168 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 STK25O00506 426 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 BET1O15155 118 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 PLA2G10O15496 165 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 ORC5O43913 435 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 CYP17A1P05093 508 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 TSPAN19P0C672 248 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 CTSAP10619 480 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 CKMT1AP12532 417 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 AZGP1P25311 298 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 SDC2P34741 201 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 XCR1P46094 333 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 CDH12P55289 794 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 RRAS2P62070 204 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 TLE2Q04725 743 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 SUZ12Q15022 739 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 BTBD16Q32M84 506 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 ZNF628Q5EBL2 1059 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 FRMPD2BQ6IN97 320 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 GALNT10Q86SR1 603 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 SIX5Q8N196 739 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 PLA2G15Q8NCC3 412 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 C19orf18Q8NEA5 215 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 APOLD1Q96LR9 279 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 DEFB118Q96PH6 123 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 PIP5K1AQ99755 562 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 DPH2Q9BQC3 489 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 FAM83CQ9BQN1 747 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 MARVELD1Q9BSK0 173 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 DUSP26Q9BV47 211 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 ZBP1Q9H171 429 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 ABCB9Q9NP78 766 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 TMEM184CQ9NVA4 438 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 TMPRSS11EQ9UL52 423 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 DNAH12Q6ZR08 3092 aa10.2□□□□□ -0.78
MTHFD1-210ENST00000555252 CCDC88CQ9P219 2028 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SCAMP2O15127 329 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 CPSF4O95639 269 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 ADAP00813 363 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SRPRAP08240 638 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 HLA-EP13747 358 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 CPEP16870 476 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 GPC1P35052 558 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 BTG1P62324 171 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 DAB2P98082 770 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 CHIT1Q13231 466 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 C1orf53Q5VUE5 145 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TRIQKQ629K1 86 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 LILRA6Q6PI73 481 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 UTS2BQ765I0 119 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 LAS2Q8IYD9 372 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TRAM1L1Q8N609 369 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 GOT1L1Q8NHS2 421 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 MAP6Q96JE9 813 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 FAM129BQ96TA1 746 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SOSTQ9BQB4 213 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC46A2Q9BY10 475 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 UCK2Q9BZX2 261 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TMEM38AQ9H6F2 299 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 NT5DC2Q9H857 520 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TRIM45Q9H8W5 580 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 ACER3Q9NUN7 267 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 RLIMQ9NVW2 624 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TAS2R16Q9NYV7 291 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TBX21Q9UL17 535 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 RAB23Q9ULC3 237 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC22A14Q9Y267 594 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 ALG5Q9Y673 324 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 A0A1W2PQL4 384 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 A0A1W2PRU2 124 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SGK494L7N484 410 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 RNASET2O00584 256 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 MYL12BO14950 172 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 BNIP3LO60238 219 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SLCO2B1O94956 709 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 LRATO95237 230 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 B3GALT4O96024 378 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 C8AP07357 584 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 FAM157BP0CG42 384 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 RHCEP18577 417 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 MYL12AP19105 171 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 CFL1P23528 166 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 PNLIPRP1P54315 467 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 PFN3P60673 137 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 IRF8Q02556 426 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 MRPL28Q13084 256 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 ILKQ13418 452 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 TP53BP2Q13625 1128 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 SF3A2Q15428 464 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 OCLNQ16625 522 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.19□□□□□ -0.786e-6■■□□□ 12.4
MTHFD1-210ENST00000555252 PYDC2Q56P42 97 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 CRB2Q5IJ48 1285 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 ZBTB37Q5TC79 503 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 BICRALQ6AI39 1079 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 GRAMD2AQ8IUY3 354 aa10.19□□□□□ -0.78
MTHFD1-210ENST00000555252 PHC2Q8IXK0 858 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms