RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CNTN5O94779 1100 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DIRAS1O95057 198 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RPS17P08708 135 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CHRM1P11229 460 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PRPS1L1P21108 318 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DVL1P1P54792 670 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CDK6Q00534 326 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 LAPTM4AQ15012 233 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 OR52W1Q6IF63 320 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 USP53Q70EK8 1073 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ACBD4Q8NC06 268 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 WDR20Q8TBZ3 569 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RAB8BQ92930 207 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF514Q96K75 400 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 MOV10Q9HCE1 1003 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 HSPB11Q9Y547 144 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SPTA1P02549 2419 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 NWD1Q149M9 1564 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 XPNPEP2O43895 674 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLC2A5P22732 501 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 LMO2P25791 158 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 GTF2BQ00403 316 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CHRNEQ04844 493 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 NIPAL3Q6P499 406 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TMPRSS12Q86WS5 348 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLC5A11Q8WWX8 675 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CWH43Q9H720 699 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 LRRC19Q9H756 370 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ASF1BQ9NVP2 202 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 A8MXE2 369 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ABCB7O75027 752 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 F8A1P23610 371 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SQSTM1Q13501 440 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 MOGSQ13724 837 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PAN3Q58A45 887 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 C15orf40Q8WUR7 153 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 G6PC3Q9BUM1 346 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 GKN1Q9NS71 199 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TEX51A0A1B0GUA7 166 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 H7C2Y5 167 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 MATN3O15232 486 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 UGT2B10P36537 528 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLC9A3P48764 834 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLC10A1Q14973 349 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 FTMTQ8N4E7 242 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 THAP4Q8WY91 577 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 IRGQQ8WZA9 623 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLC2A4RGQ9NR83 387 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CD8B2A6NJW9 211 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 K7EPI3 171 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 IMPA2O14732 288 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TGM6O95932 706 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CD8BP10966 210 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TYRP14679 529 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DPP6P42658 865 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 FXNQ16595 210 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 OR4F3Q6IEY1 312 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 LCLAT1Q6UWP7 414 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 UEVLDQ8IX04 471 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 OR2A12Q8NGT7 310 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLC30A2Q9BRI3 323 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PBDC1Q9BVG4 233 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 C2orf42Q9NWW7 574 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM107Q6UX40 140 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DPF1Q92782 380 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PTERQ96BW5 349 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TCEAL4Q96EI5 215 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 AHCTF1Q8WYP5 2266 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 MAP2K7O14733 419 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RAD1O60671 282 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CLEC3BP05452 202 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ADH6P28332 368 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SFTPDP35247 375 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CX3CR1P49238 355 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 NT5DC1Q5TFE4 455 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 LIPKQ5VXJ0 399 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SLAMF9Q96A28 289 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ROPN1LQ96C74 230 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 FAM210AQ96ND0 272 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 MYNNQ9NPC7 610 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PRODH2Q9UF12 536 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PRELID1Q9Y255 219 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RBM47A0AV96 593 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 NPHS1O60500 1241 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CAPN3P20807 821 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RPP30P78346 268 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ELOCQ15369 112 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 SIRPB2Q5JXA9 342 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ANKRD22Q5VYY1 191 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF761Q86XN6 746 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TRAM1L1Q8N609 369 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CDC6Q99741 560 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DNAJB9Q9UBS3 223 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 FAM198AQ9UFP1 575 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms