RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 FCGR1BQ92637 280 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CITED4Q96RK1 184 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 RACGAP1Q9H0H5 632 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 DMRT3Q9NQL9 472 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CNIH4Q9P003 139 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 OR1A2Q9Y585 309 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SEC16AO15027 2179 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 NDUFB5O43674 189 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 EPHX1P07099 455 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CTSLP07711 333 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 NAT2P11245 290 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 NPPBP16860 134 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 TNFSF8P32971 234 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 GJA8P48165 433 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CRYBA2P53672 197 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 MESP2Q0VG99 397 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 VEZF1Q14119 521 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 GINS1Q14691 196 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SPHARQ15513 63 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 C9orf64Q5T6V5 341 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 TMEM215Q68D42 235 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 LIPIQ6XZB0 460 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 C6orf120Q7Z4R8 191 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 KRT78Q8N1N4 520 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 OR52N2Q8NGI0 321 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.3□□□□□ -0.6
XRCC3-208ENST00000554811 LRR1Q96L50 414 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 EPYCQ99645 322 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 CENPXA8MT69 81 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 DSCR3O14972 297 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 JUNDP17535 347 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 CCT3P49368 545 aaKnown RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 NCBP2P52298 156 aaKnown RBP eCLIP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ID2Q02363 134 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 KLHL12Q53G59 568 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 GDPD3Q7L5L3 318 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SCAIQ8N9R8 606 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 NUS1Q96E22 293 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 HDHD5Q9BXW7 423 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 HDHD2Q9H0R4 259 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SMURF1Q9HCE7 757 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 GPATCH2Q9NW75 528 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 AHSPQ9NZD4 102 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ENPP4Q9Y6X5 453 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SAGE2PA6NJ88 616 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 GPX5O75715 221 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 NCR1O76036 304 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 C1orf105O95561 183 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 CTNNB1P35222 781 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 RPS19P39019 145 aaKnown RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 RAB15P59190 212 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TAS2R41P59536 307 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 RACK1P63244 317 aaKnown RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 NOGQ13253 232 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SP140Q13342 867 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 HEPACAMQ14CZ8 416 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TBRG1Q3YBR2 411 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SLC35F1Q5T1Q4 408 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 AGAP7PQ5VUJ5 663 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 NXNL2Q5VZ03 156 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TRIM69Q86WT6 500 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SFTPA1Q8IWL2 248 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 SLC38A5Q8WUX1 472 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 KLHL6Q8WZ60 621 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ZCCHC2Q9C0B9 1178 aaKnown RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ANKMY1Q9P2S6 941 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 BTNL2Q9UIR0 455 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 CFL2Q9Y281 166 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 USP34Q70CQ2 3546 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 VCANP13611 3396 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 HYAL3O43820 417 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 EIF2S1P05198 315 aaKnown RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 RHOP08100 348 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 IFI30P13284 250 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 PNLIPRP1P54315 467 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TUBA1BP68363 451 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TAP2Q03519 686 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TRIQKQ629K1 86 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ZNF517Q6ZMY9 492 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 Q6ZNB5 142 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TUBA1AQ71U36 451 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 FAM46DQ8NEK8 389 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 NLGN4YQ8NFZ3 816 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 PHF21AQ96BD5 680 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 VMP1Q96GC9 406 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 ACER3Q9NUN7 267 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TMEM45AQ9NWC5 275 aa11.29□□□□□ -0.6
XRCC3-208ENST00000554811 TEX10Q9NXF1 929 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 CRNNQ9UBG3 495 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-208ENST00000554811 CCDC182A6NF36 153 aa11.28□□□□□ -0.6
XRCC3-208ENST00000554811 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
XRCC3-208ENST00000554811 PLD2O14939 933 aa11.28□□□□□ -0.6
XRCC3-208ENST00000554811 PLOD3O60568 738 aa11.28□□□□□ -0.6
XRCC3-208ENST00000554811 FURINP09958 794 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms