RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 LCMT2O60294 686 aaKnown RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 WDR47O94967 919 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 NSA2O95478 260 aaKnown RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 HPP00738 406 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 SERPIND1P05546 499 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 IL1RNP18510 177 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 VHLP40337 213 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 HSPA7P48741 367 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 CD97P48960 835 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ERVK-8P63133 956 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 MAT1AQ00266 395 aaKnown RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 CCNIQ14094 377 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 INPP5JQ15735 1006 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 SMU1Q2TAY7 513 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 PLEKHN1Q494U1 663 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 CMPK2Q5EBM0 449 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 COQ5Q5HYK3 327 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ATG9BQ674R7 924 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 IGFL3Q6UXB1 125 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 FUNDC1Q8IVP5 155 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ARHGEF39Q8N4T4 335 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 MFSD9Q8NBP5 474 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 KCT2Q8NC54 265 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ABHD11Q8NFV4 315 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 OR4F6Q8NGB9 312 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 OR52B6Q8NGF0 335 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ZCCHC10Q8TBK6 192 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 METTL6Q8TCB7 284 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 SLC5A11Q8WWX8 675 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 OR4K3Q96R72 315 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 CDRT15Q96T59 188 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 NPAS2Q99743 824 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 NTMT1Q9BV86 223 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 IPPKQ9H8X2 491 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 S100A14Q9HCY8 104 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 CCDC167Q9P0B6 97 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 TRPS1Q9UHF7 1281 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 MRPS2Q9Y399 296 aaKnown RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 DYRK1BQ9Y463 629 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 ANGPTL3Q9Y5C1 460 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 GPR45Q9Y5Y3 372 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 PTGDR2Q9Y5Y4 395 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 SPENQ96T58 3664 aaKnown RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-214ENST00000554604 TRBC2A0A5B9 178 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 MRASO14807 208 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 NDUFS4O43181 175 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 ANPEPP15144 967 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 ME2P23368 584 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 HMOX2P30519 316 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 HNMTP50135 292 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 PSME3P61289 254 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 SKP1P63208 163 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 EEF1A2Q05639 463 aaKnown RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 ZXDCQ2QGD7 858 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 C18orf21Q32NC0 220 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 MINDY4Q4G0A6 757 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 PDCD4Q53EL6 469 aaKnown RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 FAM219BQ5XKK7 198 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 TMEM214Q6NUQ4 689 aaKnown RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 C8orf82Q6P1X6 216 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 PAOXQ6QHF9 649 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 LRRC74BQ6ZQY2 392 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 NDUFAF7Q7L592 441 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 PRSS41Q7RTY9 318 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 LRRC70Q7Z2Q7 622 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 THOC6Q86W42 341 aaKnown RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 ZC3H7AQ8IWR0 971 aaKnown RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 KBTBD2Q8IY47 623 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 Q8NA96 180 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 GALNT11Q8NCW6 608 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 OR4K1Q8NGD4 311 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 OR51Q1Q8NH59 317 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 METTL21AQ8WXB1 218 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 NEIL2Q969S2 332 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 ATP6V1E2Q96A05 226 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 TM4SF19Q96DZ7 209 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 SLC29A3Q9BZD2 475 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 EPS8L2Q9H6S3 715 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 ZBTB20Q9HC78 741 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-214ENST00000554604 HCN3Q9P1Z3 774 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 SLC22A14Q9Y267 594 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 KCNE2Q9Y6J6 123 aa11.71□□□□□ -0.53
SHMT2-214ENST00000554604 CPAMD8Q8IZJ3 1885 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 DIDO1Q9BTC0 2240 aaKnown RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 SGK494L7N484 410 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 STK16O75716 305 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 KLHL18O94889 574 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms