RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ALDH9A1P49189 494 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PKNOX1P55347 436 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TRA2BP62995 288 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 YWHAHQ04917 246 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MGAT3Q09327 533 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 BNIP2Q12982 314 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 KLF1Q13351 362 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 KLF9Q13886 244 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 LLGL1Q15334 1064 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 RPS6KA2Q15349 733 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 UAP1Q16222 522 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TIGD6Q17RP2 521 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 FAM83EQ2M2I3 478 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TYSND1Q2T9J0 566 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 DPCR1Q3MIW9 517 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 RNF212Q495C1 297 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ZBED5Q49AG3 693 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ACSBG2Q5FVE4 666 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SLC9C2Q5TAH2 1124 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MANEALQ5VSG8 457 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TYW3Q6IPR3 259 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 RPL13AP3Q6NVV1 102 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF544Q6NX49 715 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM81Q6P7N7 255 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ZCCHC12Q6PEW1 402 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CCDC137Q6PK04 289 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 KIAA1324Q6UXG2 1013 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 IL20RBQ6UXL0 311 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PLEKHG7Q6ZR37 379 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 USP49Q70CQ1 688 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CREB3L2Q70SY1 520 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SLC24A5Q71RS6 500 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 RRM2BQ7LG56 351 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 BHLHA15Q7RTS1 189 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PIWIL3Q7Z3Z3 882 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ARPINQ7Z6K5 226 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 IGFN1Q86VF2 1251 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MON1AQ86VX9 555 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PLCZ1Q86YW0 608 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CNGA4Q8IV77 575 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MCOLN2Q8IZK6 566 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CENPLQ8N0S6 344 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 C4orf33Q8N1A6 199 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 FBXW8Q8N3Y1 598 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 B3GALNT2Q8NCR0 500 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 RBM15BQ8NDT2 890 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF248Q8NDW4 579 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 C19orf18Q8NEA5 215 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SEMA6DQ8NFY4 1073 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 OR2L5Q8NG80 312 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 OR13C2Q8NGS9 318 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SPATA20Q8TB22 786 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ACER1Q8TDN7 264 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ELP5Q8TE02 316 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CREB3L4Q8TEY5 395 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 ING5Q8WYH8 240 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MAFIPQ8WZ33 124 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 THRSPQ92748 146 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PHF21BQ96EK2 531 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 DUS3LQ96G46 650 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM41AQ96HV5 264 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 C10orf90Q96M02 699 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 OR5M11Q96RB7 305 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CYP2S1Q96SQ9 504 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM175Q9BSA9 504 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MTG1Q9BT17 334 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PTDSS2Q9BVG9 487 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MND1Q9BWT6 205 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 LRRC2Q9BYS8 371 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 POTEKPQ9BYX7 375 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 BTBD1Q9H0C5 482 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SPNS1Q9H2V7 528 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 EBF3Q9H4W6 596 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 JMJD4Q9H9V9 463 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 GLOD4Q9HC38 313 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 MRPL47Q9HD33 250 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 HMG20AQ9NP66 347 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TDP1Q9NUW8 608 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SMOXQ9NWM0 555 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 IMPAD1Q9NX62 359 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 JKAMPQ9P055 326 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CNOT8Q9UFF9 292 aaKnown RBP4.21□□□□□ -1.74
ATXN3-227ENST00000554491 SERGEFQ9UGK8 458 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PCDHA6Q9UN73 950 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 NEU2Q9Y3R4 380 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 UGT2A1Q9Y4X1 527 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PCDHGB1Q9Y5G3 927 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 NUBP2Q9Y5Y2 271 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 DENND4AQ7Z401 1863 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 TCHHQ07283 1943 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 NEDD4P46934 1319 aa4.21□□□□□ -1.74
ATXN3-227ENST00000554491 PLXNA4Q9HCM2 1894 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 A0A0G2JMP0 313 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 A0A0U1RQK1 487 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 A0A1B0GV90 55 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF320A2RRD8 509 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 A6NLC8 198 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 RHPN2P1A8MT19 583 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms