RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ABHD18Q0P651 414 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 E2F2Q14209 437 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 CPTPQ5TA50 214 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 ADCK2Q7Z695 626 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 TSPYL5Q86VY4 417 aaPredicted RBP13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 LACC1Q8IV20 430 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 LAS2Q8IYD9 372 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 LINC01555Q8NAE3 123 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 WDR48Q8TAF3 677 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 SETD7Q8WTS6 366 aaKnown RBP13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 COPS4Q9BT78 406 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 CDADC1Q9BWV3 514 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 OR51E2Q9H255 320 aa13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 NDRG2Q9UN36 371 aaKnown RBP13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 SAMD4AQ9UPU9 718 aaKnown RBP13.96□□□□□ -0.17
PPP4R3A-201ENST00000554308 TCRBV21S2A2A0A5A6 115 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 FAM47E-STBD1D6RA91 191 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 CCNDBP1O95273 360 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 FABP3P05413 133 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 ABCB1P08183 1280 aaPredicted RBP13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 IL1RNP18510 177 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 ARHGDIAP52565 204 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 NPRL3Q12980 569 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 TPRG1LQ5T0D9 272 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 UBE2UQ5VVX9 321 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 FAM180BQ6P0A1 224 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 GDPD3Q7L5L3 318 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 METTL4Q8N3J2 472 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 PARP16Q8N5Y8 322 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 HMGB4Q8WW32 186 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 JPH3Q8WXH2 748 aaPredicted RBP13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 TPD52L3Q96J77 140 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 FCRL1Q96LA6 429 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 MENTQ9BUN1 341 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 DUSP26Q9BV47 211 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 TMEM184CQ9NVA4 438 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 THUMPD1Q9NXG2 353 aaKnown RBP13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 SLC17A4Q9Y2C5 497 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 MAN2B2Q9Y2E5 1009 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 PCDHGA6Q9Y5G7 932 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 HSPE1-MOB4S4R3N1 261 aa13.96□□□□□ -0.18
PPP4R3A-201ENST00000554308 TRBV23OR9-2A0A075B6M9 112 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 GPR89AB7ZAQ6 455 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 GPR89BP0CG08 455 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ACPPP15309 386 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 TIA1P31483 386 aaKnown RBP eCLIP13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 TPMTP51580 245 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 WNT3P56703 355 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 TIGD6Q17RP2 521 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 DUOXA1Q1HG43 343 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ENPP7Q6UWV6 458 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ZZZ3Q8IYH5 903 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 PGBD3Q8N328 593 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 OR4K1Q8NGD4 311 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 WDR34Q96EX3 536 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ZNF486Q96H40 463 aaPredicted RBP13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 Q96MT0 163 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 MMP27Q9H306 513 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 TESMINQ9Y4I5 508 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 VPS13AQ96RL7 3174 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ANKDD1BA6NHY2 528 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 FOXE1O00358 373 aaPredicted RBP13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 SCAMP2O15127 329 aaKnown RBP13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ASNA1O43681 348 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 SCN2BO60939 215 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 KCNK5O95279 499 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 SEMG1P04279 462 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 NTRK1P04629 796 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 NUDT7P0C024 238 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 ENGP17813 658 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 IDSP22304 550 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 AQP1P29972 269 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 BMP8BP34820 402 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 MTAPQ13126 283 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 PROX2Q3B8N5 592 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 LCTLQ6UWM7 567 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 CCBE1Q6UXH8 406 aaPredicted RBP13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 FAM129CQ86XR2 697 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 PTOV1Q86YD1 416 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 CCDC103Q8IW40 242 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 KRT78Q8N1N4 520 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 NELL1Q92832 810 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 TSACCQ96A04 125 aaPredicted RBP13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 PDXPQ96GD0 296 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 CENPOQ9BU64 300 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 TAS2R16Q9NYV7 291 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 IFT52Q9Y366 437 aa13.95□□□□□ -0.18
PPP4R3A-201ENST00000554308 CLIC1O00299 241 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 RTCAO00442 366 aaKnown RBP13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 SERPIND1P05546 499 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 AK4P27144 223 aaPredicted RBP13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 CTSKP43235 329 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 CASP9P55211 416 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 COPZ1P61923 177 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 TP53BP2Q13625 1128 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 ZNF181Q2M3W8 571 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 CCDC80Q76M96 950 aa13.94□□□□□ -0.18
PPP4R3A-201ENST00000554308 NANOGNBQ7Z5D8 188 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms