RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TECRLQ5HYJ1 363 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 C1orf185Q5T7R7 199 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 AGAP6Q5VW22 663 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 LIPKQ5VXJ0 399 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 LYSMD4Q5XG99 296 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 TPGS2Q68CL5 300 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 KLHL10Q6JEL2 608 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 LCN10Q6JVE6 187 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GAGE2AQ6NT46 116 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 FUT10Q6P4F1 479 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ADGRD2Q7Z7M1 963 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GRAMD2AQ8IUY3 354 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 MMD2Q8IY49 270 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 TTC5Q8N0Z6 440 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CERS5Q8N5B7 392 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GBGT1Q8N5D6 347 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 LRRC17Q8N6Y2 441 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 FAM184AQ8NB25 1140 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 SLC38A9Q8NBW4 561 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 NOA1Q8NC60 698 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 STKLD1Q8NE28 680 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 FAM71CQ8NEG0 241 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GPRC5AQ8NFJ5 357 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CCDC148Q8NFR7 591 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 OR11H4Q8NGC9 324 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 OR6C4Q8NGE1 309 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 OR8J1Q8NGP2 316 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 UBTD2Q8WUN7 234 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CCDC107Q8WV48 283 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ANKRD49Q8WVL7 239 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PIGBQ92521 554 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PHYHIPQ92561 330 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 P2RX5Q93086 422 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 TSACCQ96A04 125 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 GIMAP5Q96F15 307 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 SENP5Q96HI0 755 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 OXNAD1Q96HP4 312 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 TPD52L3Q96J77 140 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 COG3Q96JB2 828 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 FAM71F1Q96KD3 344 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 CNOT6LQ96LI5 555 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 TSSK2Q96PF2 358 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PSKH2Q96QS6 385 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 RASL10BQ96S79 203 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CCDC3Q9BQI4 270 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 JPH2Q9BR39 696 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 URM1Q9BTM9 101 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 NFKBIZQ9BYH8 718 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PANK2Q9BZ23 570 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CRNKL1Q9BZJ0 848 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 TRPV6Q9H1D0 765 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 DPEP2Q9H4A9 486 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CRLF2Q9HC73 371 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 TRPV5Q9NQA5 729 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 FAM114A2Q9NRY5 505 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GLRX2Q9NS18 164 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GPR173Q9NS66 373 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 FAM207AQ9NSI2 230 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 BARHL2Q9NY43 387 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 VPS54Q9P1Q0 977 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 KLHL8Q9P2G9 620 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 ATXN10Q9UBB4 475 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GAGE2DQ9UEU5 116 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ASIC3Q9UHC3 531 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 NARFQ9UHQ1 456 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PSORS1C1Q9UIG5 152 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 DAPK2Q9UIK4 370 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CFAP45Q9UL16 551 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 HEG1Q9ULI3 1381 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ATG4BQ9Y4P1 393 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 DDX49Q9Y6V7 483 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 COLEC10Q9Y6Z7 277 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CROCCQ5TZA2 2017 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 NCAPD2Q15021 1401 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PFASO15067 1338 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 KIF16BQ96L93 1317 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PCDH11YQ9BZA8 1340 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TRAV24A0A0B4J272 114 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 A0A1B0GUL7 405 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 LINC00854A0A1B0GVQ3 168 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CASTOR2A6NHX0 329 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 MEI4A8MW99 385 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 M0R296 226 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CCL24O00175 119 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ZNF197O14709 1029 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 OGTO15294 1046 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 BUB1O43683 1085 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 BUD23O43709 281 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 GPR137BO60478 399 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TBX19O60806 448 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 B4GALT2O60909 372 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 DNAJB6O75190 326 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 GRAP2O75791 330 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 FLOT1O75955 427 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TM7SF2O76062 418 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CALCAP01258 141 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CSF2P04141 144 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 H1F0P07305 194 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 YES1P07947 543 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 GSTA2P09210 222 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms