RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 LRFN3Q9BTN0 628 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 EDEM2Q9BV94 578 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 GLIPR2Q9H4G4 154 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 PIF1Q9H611 641 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CXorf36Q9H7Y0 433 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CLK4Q9HAZ1 481 aaKnown RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 FANCEQ9HB96 536 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 NEUROD4Q9HD90 331 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CUTCQ9NTM9 273 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 EGFL7Q9UHF1 273 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CORO2BQ9UQ03 480 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 PCDHB3Q9Y5E6 796 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 D6RAR5 112 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 CYR61O00622 381 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 CHST10O43529 356 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 PSMG1O95456 288 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 STAMBPO95630 424 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 CSNK2A2P19784 350 aaPredicted RBP16.58■□□□□ 0.24
PSEN1-206ENST00000553447 UQCRC2P22695 453 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 SOAT1P35610 550 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 GCGRP47871 477 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 ERFP50548 548 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 NCBP2P52298 156 aaKnown RBP eCLIP16.58■□□□□ 0.242e-8■■□□□ 11.9
PSEN1-206ENST00000553447 ACY1Q03154 408 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 HSPB3Q12988 150 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 TLDC1Q6P9B6 456 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 DHFR2Q86XF0 187 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 SLITRK4Q8IW52 837 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 GPR135Q8IZ08 494 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 C10orf111Q8N326 155 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 OR2T12Q8NG77 320 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 PSMA8Q8TAA3 256 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 ZNF681Q96N22 645 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 TMEM9BQ9NQ34 198 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 FGF21Q9NSA1 209 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 SIRT3Q9NTG7 399 aaPredicted RBP16.58■□□□□ 0.24
PSEN1-206ENST00000553447 ACTR3BQ9P1U1 418 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 SERTAD3Q9UJW9 196 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 CLCA2Q9UQC9 943 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 SNX13Q9Y5W8 968 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 ZNF780BQ9Y6R6 833 aa16.58■□□□□ 0.24
PSEN1-206ENST00000553447 NUP210LQ5VU65 1888 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 H0YIG0 161 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 ARPC2O15144 300 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 KRT36O76013 467 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 LMNAP02545 664 aaKnown RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 C8orf89P0DMQ9 161 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 ATP6V1B2P21281 511 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 FEN1P39748 380 aaKnown RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 CDK9P50750 372 aaKnown RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 DUSP2Q05923 314 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 ZNF750Q32MQ0 723 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 YOD1Q5VVQ6 348 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 LCN8Q6JVE9 175 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 SERPINA11Q86U17 422 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 NAXDQ8IW45 347 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 SAMD14Q8IZD0 417 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 SHISA5Q8N114 240 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 RCBTB1Q8NDN9 531 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 TMEM52Q8NDY8 209 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 TNIP2Q8NFZ5 429 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 OR4K14Q8NGD5 310 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 OR5AK3PQ8NH89 298 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 SUN3Q8TAQ9 357 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 PNPT1Q8TCS8 783 aaKnown RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 SLC26A7Q8TE54 656 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 ADAMTS18Q8TE60 1221 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 ATOH1Q92858 354 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 MMABQ96EY8 250 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-206ENST00000553447 TRIM15Q9C019 465 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 EPS8L2Q9H6S3 715 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 RXFP3Q9NSD7 469 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 SEMA4GQ9NTN9 838 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 HCN3Q9P1Z3 774 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 ACSL6Q9UKU0 697 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 HCN4Q9Y3Q4 1203 aa16.57■□□□□ 0.24
PSEN1-206ENST00000553447 RNF103-CHMP3A0A140T963 221 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 A0A1W2PS29 197 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 FAM227AF5H4B4 570 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 ZNF749O43361 778 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 FKBP6O75344 327 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 KRT75O95678 551 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 NTRK1P04629 796 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 RNH1P13489 461 aaKnown RBP16.56■□□□□ 0.24
PSEN1-206ENST00000553447 GPC1P35052 558 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 CHI3L1P36222 383 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-206ENST00000553447 TRA2AQ13595 282 aaKnown RBP eCLIP16.56■□□□□ 0.24
PSEN1-206ENST00000553447 CSRP2Q16527 193 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 PHF19Q5T6S3 580 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 AAGABQ6PD74 315 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 CYP2R1Q6VVX0 501 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 TTLL10Q6ZVT0 673 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 SPATA24Q86W54 205 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 MICU2Q8IYU8 434 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 CCDC116Q8IYX3 515 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 METTL27Q8N6F8 245 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-206ENST00000553447 TANKQ92844 425 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 MVB12AQ96EY5 273 aa16.56■□□□□ 0.24
PSEN1-206ENST00000553447 REXO5Q96IC2 774 aaKnown RBP16.56■□□□□ 0.24
PSEN1-206ENST00000553447 LRGUKQ96M69 825 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms