RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 HMBSP08397 361 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 TSPY4P0CV99 314 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 TSPY10P0CW01 314 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 PRDX2P32119 198 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 PAX9P55771 341 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 RPL36AP83881 106 aaKnown RBP4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CDKL1Q00532 357 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 GUCY2DQ02846 1103 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 KRT81Q14533 505 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 ZNF528Q3MIS6 628 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 C1orf189Q5VU69 101 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 ARHGAP17Q68EM7 881 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 SLC25A24Q6NUK1 477 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CDC42EP5Q6NZY7 148 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 HOGA1Q86XE5 327 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 WDR49Q8IV35 697 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 PARP8Q8N3A8 854 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CERS5Q8N5B7 392 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
SCFD1-209ENST00000553280 DENND6BQ8NEG7 585 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 SMAP2Q8WU79 429 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-209ENST00000553280 EPYCQ99645 322 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 FICDQ9BVA6 458 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CARD6Q9BX69 1037 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 HOXD1Q9GZZ0 328 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 VAT1LQ9HCJ6 419 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 TMOD2Q9NZR1 351 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 LHX3Q9UBR4 397 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 ATG4BQ9Y4P1 393 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 KIF7Q2M1P5 1343 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CUX2O14529 1486 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 C15orf61A6NNL5 157 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 ZNF195O14628 629 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 KIAA0513O60268 411 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 VPS26AO75436 327 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 APBB3O95704 486 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 LYNP07948 512 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 GP9P14770 177 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 CYP2F1P24903 491 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 EDNRAP25101 427 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 MAP2K2P36507 400 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 ELP6Q0PNE2 266 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 NME3Q13232 169 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 RIGQ13278 110 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 BTG3Q14201 252 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-209ENST00000553280 ZSWIM7Q19AV6 140 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 FAM76BQ5HYJ3 339 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 FFAR4Q5NUL3 377 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 STPG1Q5TH74 334 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 ITIH5Q86UX2 942 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 APLFQ8IW19 511 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-209ENST00000553280 OR5M9Q8NGP3 310 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 OR6S1Q8NH40 331 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 TMEM37Q8WXS4 190 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 RAB7BQ96AH8 199 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 RBM18Q96H35 190 aaKnown RBP4.35□□□□□ -1.71
SCFD1-209ENST00000553280 ZNF486Q96H40 463 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-209ENST00000553280 UHRF2Q96PU4 802 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 RAB40CQ96S21 281 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 GPA33Q99795 319 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 RIBC2Q9H4K1 309 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 FAM124BQ9H5Z6 455 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-209ENST00000553280 MTHFD2LQ9H903 347 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-209ENST00000553280 LAMP5Q9UJQ1 280 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 ABCC4O15439 1325 aa4.35□□□□□ -1.71
SCFD1-209ENST00000553280 FAM230AA0A1W2PPH8 454 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 NPIPB9F8W1W9 429 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 B4GAT1O43505 415 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 TOM1L1O75674 476 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 CALCAP01258 141 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 IGLV2-11P01706 119 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 KRT8P05787 483 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 RRASP10301 218 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 IL4RP24394 825 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 PTPN4P29074 926 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 CHRNB4P30926 498 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 GPR183P32249 361 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 TRPC1P48995 793 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 HSF2Q03933 536 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 CLPPQ16740 277 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-209ENST00000553280 RFTN2Q52LD8 501 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-209ENST00000553280 LIPKQ5VXJ0 399 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 CHMP1BQ7LBR1 199 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 PPP1R42Q7Z4L9 355 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 ZNF573Q86YE8 665 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 MISPQ8IVT2 679 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 TBC1D21Q8IYX1 336 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 RAB42Q8N4Z0 105 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 CNBD1Q8NA66 436 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 TCP11Q8WWU5 503 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 DEFB118Q96PH6 123 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 DCTN5Q9BTE1 182 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 NDUFAF3Q9BU61 184 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 PINK1Q9BXM7 581 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 TEX13BQ9BXU2 312 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 ACTR8Q9H981 624 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 UBE2TQ9NPD8 197 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms