RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 NPFFR2Q9Y5X5 522 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CR1P17927 2039 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 WWP2O00308 870 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 EIF3HO15372 352 aaKnown RBP eCLIP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 CNOT4O95628 575 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 TTC4O95801 387 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 SYF2O95926 243 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 IL18BPO95998 194 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 RFPL3SP0C7P2 107 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF888P0CJ79 500 aaPredicted RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 CDH1P12830 882 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 NPPBP16860 134 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 CHRM3P20309 590 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 MGAT1P26572 445 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 NMBRP28336 390 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 PPP2R1BP30154 601 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 HK2P52789 917 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 SESN2P58004 480 aaPredicted RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 TBPL1P62380 186 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF844Q08AG5 666 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 CAPRIN1Q14444 709 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 KRT71Q3SY84 523 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 PCID2Q5JVF3 399 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 FAM47EQ6ZV65 393 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 C17orf64Q86WR6 236 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 IGDCC3Q8IVU1 814 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 AGGF1Q8N302 714 aaeCLIP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 PLPP7Q8NBV4 271 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 MCUQ8NE86 351 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 PPHLN1Q8NEY8 458 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 NEIL3Q8TAT5 605 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 PYROXD1Q8WU10 500 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 ISL2Q96A47 359 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 ARL8AQ96BM9 186 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 SECISBP2Q96T21 854 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 SGPP1Q9BX95 441 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 CENPHQ9H3R5 247 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 EIF2B3Q9NR50 452 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 SAMD15Q9P1V8 674 aa10.46□□□□□ -0.73
SUPT16H-202ENST00000552829 E7ESA3 106 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 NDUFS4O43181 175 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SIAH2O43255 324 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 ZBTB14O43829 449 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 IL2RAP01589 272 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SSTR1P30872 391 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SLCO1A2P46721 670 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 GPX6P59796 221 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 CRADDP78560 199 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SARNPP82979 210 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 EFTUD2Q15029 972 aaKnown RBP eCLIP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 TTMPQ5BVD1 217 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 RNF187Q5TA31 235 aaPredicted RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 HECTD2Q5U5R9 776 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 NSUN5P2Q63ZY6 315 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 MRNIPQ6NTE8 343 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 PODNL1Q6PEZ8 512 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 LCTLQ6UWM7 567 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SDCCAG8Q86SQ7 713 aaPredicted RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 CA13Q8N1Q1 262 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 LRRC25Q8N386 305 aaPredicted RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 GOLGA6L1Q8N7Z2 621 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 IGFBPL1Q8WX77 278 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 MRRFQ96E11 262 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 GSX2Q9BZM3 304 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 AICDAQ9GZX7 198 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SLC6A15Q9H2J7 730 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 EXO5Q9H790 373 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 PROK2Q9HC23 129 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 PNO1Q9NRX1 252 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SYBUQ9NX95 663 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 QPCTLQ9NXS2 382 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 CRYL1Q9Y2S2 319 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 MAD1L1Q9Y6D9 718 aa10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-202ENST00000552829 A0A087WUV0 522 aaPredicted RBP10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 TRBC2A0A5B9 178 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 TLDC2A0PJX2 215 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 SH3D21A4FU49 640 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 MBD3L3A6NE82 208 aaPredicted RBP10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 LRRC3CA6NJW4 275 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 CD8B2A6NJW9 211 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 C4orf51C9J302 202 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 OR1F1O43749 312 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 NUDT17P0C025 328 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 PAX1P15863 534 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 CTSSP25774 331 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 GRK3P35626 688 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 PIGAP37287 484 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 CRYZQ08257 329 aaKnown RBP10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 ACKR1Q16570 336 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 HSP90B2PQ58FF3 399 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 HEPHL1Q6MZM0 1159 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 CASC4Q6P4E1 433 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 ABHD13Q7L211 337 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 RELL1Q8IUW5 271 aa10.44□□□□□ -0.74
SUPT16H-202ENST00000552829 PALM2Q8IXS6 379 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms