RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TRBV11-1A0A0K0K1C0 115 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 GNG14A0A1W2PPG7 69 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 GLOD5A6NK44 160 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 C17orf105B2RV13 164 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 AZIN1O14977 448 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 TM9SF1O15321 606 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 OR10H2O60403 315 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 UROSP10746 265 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 CHN1P15882 459 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 HMGCS1Q01581 520 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 GALNT1Q10472 559 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 TBL3Q12788 808 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 SPDYAQ5MJ70 313 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 ACER2Q5QJU3 275 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 Q6ZS92 163 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 NUDCD3Q8IVD9 361 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 KIF2BQ8N4N8 673 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 NFAM1Q8NET5 270 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 ELP5Q8TE02 316 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 NCLNQ969V3 563 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 ANKRD9Q96BM1 317 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 RBM18Q96H35 190 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 RNF32Q9H0A6 362 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 RRAGDQ9NQL2 400 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 ARGLU1Q9NWB6 273 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 TEX10Q9NXF1 929 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 MCM8Q9UJA3 840 aa17.26■□□□□ 0.35
PRPF40B-216ENST00000552301 J3QKU1 62 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 PCDH7O60245 1069 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 SORBS2O94875 1100 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 ZWINTO95229 277 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 GPR75O95800 540 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 BPGMP07738 259 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 ALOX15P16050 662 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 PIK3R1P27986 724 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 SERPINB3P29508 390 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 STT3AP46977 705 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 SERPINB4P48594 390 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 BTKQ06187 659 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 ZNF169Q14929 603 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 PLEKHN1Q494U1 663 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 NDUFAF5Q5TEU4 345 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 CLEC6AQ6EIG7 209 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 H3F3CQ6NXT2 135 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 ZCCHC23Q6ZST2 131 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 RPS19BP1Q86WX3 136 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 CRLF3Q8IUI8 442 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 LGI4Q8N135 537 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 BEST3Q8N1M1 668 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 MORN4Q8NDC4 146 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 SUN3Q8TAQ9 357 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 CHTF18Q8WVB6 975 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 OR8D2Q9GZM6 311 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 PLA2G3Q9NZ20 509 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 COPS7AQ9UBW8 275 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 CSAG2Q9Y5P2 127 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 CFAP46Q8IYW2 2715 aa17.25■□□□□ 0.35
PRPF40B-216ENST00000552301 CPAMD8Q8IZJ3 1885 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 BOD1L1Q8NFC6 3051 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 TRAV17A0A0B4J275 112 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 C1orf226A1L170 272 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 OR5H15A6NDH6 313 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 WDPCPO95876 746 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 F10P00742 488 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 NEFHP12036 1026 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 SERPINB5P36952 375 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 ETV4P43268 484 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 MLLT10P55197 1068 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 TRA2BP62995 288 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 IGLV3-21P80748 117 aaPredicted RBP17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 CASP8Q14790 479 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 C6orf163Q5TEZ5 329 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 ST13P4Q8IZP2 240 aaPredicted RBP17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 CPT1CQ8TCG5 803 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 HAS2Q92819 552 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 APIPQ96GX9 242 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 PKNOX2Q96KN3 472 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 ART5Q96L15 291 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 CDCP1Q9H5V8 836 aa17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 PPIEQ9UNP9 301 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 GCN1Q92616 2671 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-216ENST00000552301 SERTM1A2A2V5 107 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 WDR91A4D1P6 747 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 GABRR3A8MPY1 467 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 FCHO1O14526 889 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 RSL1D1O76021 490 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 ZFAND5O76080 213 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 CHRNGP07510 517 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 TIA1P31483 386 aaKnown RBP eCLIP17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 ALDH9A1P49189 494 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 OC90Q02509 493 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 TNFAIP8L3Q5GJ75 292 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 ARL13AQ5H913 290 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 Q8NA96 180 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 APCDD1LQ8NCL9 501 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 OR4K14Q8NGD5 310 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 OR1N1Q8NGS0 311 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 SLC2A12Q8TD20 617 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 UTP23Q9BRU9 249 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms