RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 GCNT2Q8N0V5 402 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 ELMOD1Q8N336 334 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 TCEANCQ8N8B7 351 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 CCDC197Q8NCU1 140 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF397Q8NF99 534 aaPredicted RBP3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 STEAP2Q8NFT2 490 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 TRIM58Q8NG06 486 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 GOLGA5Q8TBA6 731 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 PCED1BQ96HM7 432 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 MAGED4Q96JG8 741 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 DEFB118Q96PH6 123 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 ACCSQ96QU6 501 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 WRAP53Q9BUR4 548 aaKnown RBP3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 RAB11FIP5Q9BXF6 653 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 TDRD1Q9BXT4 1180 aaKnown RBP3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 SLC29A3Q9BZD2 475 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 FAM124BQ9H5Z6 455 aaPredicted RBP3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 BICC1Q9H694 974 aaKnown RBP3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 CALHM2Q9HA72 323 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 P2RX2Q9UBL9 471 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 MIOXQ9UGB7 285 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 ASB3Q9Y575 518 aa3.55□□□□□ -1.84
LSM6P2-201ENST00000552208 KIF7Q2M1P5 1343 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 LGALS8O00214 317 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 XPO1O14980 1071 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 GPRIN2O60269 458 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 KHDRBS3O75525 346 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 MFN2O95140 757 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ASNSP08243 561 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 HMBSP08397 361 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 EZRP15311 586 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 CYP11B1P15538 503 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 RPL35AP18077 110 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 PAICSP22234 425 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 EDNRAP25101 427 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 PBLDP30039 288 aaPredicted RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 MAT2AP31153 395 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 FEN1P39748 380 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 SOX3P41225 446 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 CDKN2AP42771 156 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ACADSBP45954 432 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 SLC1A6P48664 564 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 NPY2RP49146 381 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 FHITP49789 147 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 NANOS2P60321 138 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 UBE2HP62256 183 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 SPIBQ01892 262 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 IL24Q13007 206 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 RIGQ13278 110 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ATAD3BQ5T9A4 648 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ATP1A1-AS1Q5TC04 95 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF790Q6PG37 636 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 CBLN3Q6UW01 205 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 RBMS3Q6XE24 437 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 Q6ZVQ6 151 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 PAQR9Q6ZVX9 377 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ERASQ7Z444 233 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 LHFPL4Q7Z7J7 247 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 TRPT1Q86TN4 253 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 PARP8Q8N3A8 854 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ZCCHC7Q8N3Z6 543 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 DMBX1Q8NFW5 382 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNRF4Q8WWF5 429 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 TMEM37Q8WXS4 190 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 CD101Q93033 1021 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 CASD1Q96PB1 797 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 RAB40CQ96S21 281 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 RBM24Q9BX46 236 aaKnown RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 NACA2Q9H009 215 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 VPS33BQ9H267 617 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 WDR76Q9H967 626 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 S100A14Q9HCY8 104 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 STARD5Q9NSY2 213 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ZFP57Q9NU63 452 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 SMPD3Q9NY59 655 aaPredicted RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ERVK-18Q9QC07 812 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 BCAP29Q9UHQ4 241 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF490Q9ULM2 529 aaPredicted RBP3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 B9D1Q9UPM9 204 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 ARID2Q68CP9 1835 aa3.54□□□□□ -1.84
LSM6P2-201ENST00000552208 SF3B1O75533 1304 aaKnown RBP eCLIP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 PLSCR5A0PG75 271 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 SDHDO14521 159 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 MAGEB3O15480 346 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 GMFGO60234 142 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 STK17BO94768 372 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ANGPTL1O95841 491 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ALPLP05186 524 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 CA3P07451 260 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 TPM2P07951 284 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ERVK-10P10266 1014 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 MYOGP15173 224 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 TNNI3P19429 210 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 TRIM23P36406 574 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 PTGFRP43088 359 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ACADVLP49748 655 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 HMGN5P82970 282 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms