RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 SH3BGRLO75368 114 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 SIX3O95343 332 aaPredicted RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 ABHD2P08910 425 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 RBP1P09455 135 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 CD46P15529 392 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 HIST1H1TP22492 207 aaPredicted RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 PIK3CBP42338 1070 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 SSR2P43308 183 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 CLCN2P51788 898 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 MLF1P58340 268 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 PHEXP78562 749 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 ELAVL1Q15717 326 aaKnown RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 TSNAXIP1Q2TAA8 658 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 CES4AQ5XG92 561 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 IFT20Q8IY31 132 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 ARMC10Q8N2F6 343 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 RNF175Q8N4F7 328 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 HORMAD2Q8N7B1 307 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 PTGR2Q8N8N7 351 aaPredicted RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 PHF10Q8WUB8 498 aaKnown RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 REPS1Q96D71 796 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 TRIM44Q96DX7 344 aaPredicted RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 VMP1Q96GC9 406 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 MAPKAP1Q9BPZ7 522 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 HES7Q9BYE0 225 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 DEFB126Q9BYW3 111 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 OR51B5Q9H339 312 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 IPPKQ9H8X2 491 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 NPDC1Q9NQX5 325 aaPredicted RBP14.35□□□□□ -0.11
BRF1-220ENST00000552127 KLHL1Q9NR64 748 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 KCMF1Q9P0J7 381 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 SPACA6W5XKT8 324 aa14.35□□□□□ -0.11
BRF1-220ENST00000552127 H0YIV9 168 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 FCHO1O14526 889 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 CTNSO60931 367 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 NEURL1O76050 574 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 C8BP07358 591 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 COL6A2P12110 1019 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 EEF1DP29692 281 aaKnown RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 MEOX1P50221 254 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 RAP1GDS1P52306 607 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 DEPDC1Q5TB30 811 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 ZNF468Q5VIY5 522 aaPredicted RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 SPINK14Q6IE38 97 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 TMEM178AQ8NBL3 297 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 LRRN4CLQ8ND94 238 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 THAP3Q8WTV1 239 aaPredicted RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 NCLNQ969V3 563 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 RGMAQ96B86 450 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 SCYL1Q96KG9 808 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 MTERF1Q99551 399 aaKnown RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 CENPKQ9BS16 269 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 SORBS1Q9BX66 1292 aaKnown RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 LIME1Q9H400 295 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 LRFN1Q9P244 771 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 ST6GALNAC2Q9UJ37 374 aa14.34□□□□□ -0.11
BRF1-220ENST00000552127 ZNF223Q9UK11 482 aaPredicted RBP14.34□□□□□ -0.11
BRF1-220ENST00000552127 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 STX16O14662 325 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 SMIM24O75264 130 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 SLC25A12O75746 678 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 SP1P08047 785 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 TRHRP34981 398 aaPredicted RBP14.33□□□□□ -0.12
BRF1-220ENST00000552127 GPR143P51810 404 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 RPS13P62277 151 aaKnown RBP14.33□□□□□ -0.12
BRF1-220ENST00000552127 STX4Q12846 297 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 CPSF6Q16630 551 aaKnown RBP eCLIP14.33□□□□□ -0.12
BRF1-220ENST00000552127 OR4C11Q6IEV9 310 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 TRMT10CQ7L0Y3 403 aaKnown RBP14.33□□□□□ -0.12
BRF1-220ENST00000552127 DMRTC2Q8IXT2 367 aaPredicted RBP14.33□□□□□ -0.12
BRF1-220ENST00000552127 TMEM132CQ8N3T6 1108 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 L3MBTL4Q8NA19 623 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 AGAP11Q8TF27 550 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 GPR137Q96N19 417 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 CCDC77Q9BR77 488 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 TRIM45Q9H8W5 580 aaPredicted RBP14.33□□□□□ -0.12
BRF1-220ENST00000552127 COQ3Q9NZJ6 369 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 KCNN3Q9UGI6 736 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 FBXW2Q9UKT8 454 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
BRF1-220ENST00000552127 ASPDHA6ND91 283 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 PLPP1O14494 284 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 OR7A17O14581 309 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 ZNHIT1O43257 154 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 NME2P1O60361 137 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 LDB3O75112 727 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 ZWINTO95229 277 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 CLDN9O95484 217 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 IFNA16P05015 189 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 SNRPAP09012 282 aaKnown RBP14.32□□□□□ -0.12
BRF1-220ENST00000552127 RHOXF2BP0C7M4 288 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 NME2P22392 152 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 CPN2P22792 545 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 GCAP28676 217 aa14.32□□□□□ -0.12
BRF1-220ENST00000552127 ARL1P40616 181 aaPredicted RBP14.32□□□□□ -0.12
BRF1-220ENST00000552127 CYB561P49447 251 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms