RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF501Q96CX3 271 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF845Q96IR2 970 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 MAP3K3Q99759 626 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 ELOVL1Q9BW60 279 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 MAK16Q9BXY0 300 aaKnown RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 OSGEPL1Q9H4B0 414 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 ASB8Q9H765 288 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 KIR3DX1Q9H7L2 352 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 LRRC40Q9H9A6 602 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 MOV10Q9HCE1 1003 aaKnown RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 FAM60AQ9NP50 221 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 LZTFL1Q9NQ48 299 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 EIF2B3Q9NR50 452 aaKnown RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 SLC22A11Q9NSA0 550 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 POMT2Q9UKY4 750 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 TTC7AQ9ULT0 858 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 RUVBL2Q9Y230 463 aaKnown RBP4.65□□□□□ -1.67
SCAF11-214ENST00000550893 BTRCQ9Y297 605 aa4.65□□□□□ -1.67
SCAF11-214ENST00000550893 SPTBN1Q01082 2364 aaKnown RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 HRNRQ86YZ3 2850 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 TACC2O95359 2948 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 EXPH5Q8NEV8 1989 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 IGKV1-8A0A0C4DH67 115 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CLEC18AA5D8T8 446 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CD8B2A6NJW9 211 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 A8MU76 341 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 H3BNX3 289 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 STX7O15400 261 aaKnown RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 RAD1O60671 282 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 STK17BO94768 372 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 WISP3O95389 354 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 FGGP02679 453 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 ENO1P06733 434 aaKnown RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 ERGP11308 486 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 TPSB2P20231 275 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 MSNP26038 577 aaKnown RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 TMPRSS3P57727 454 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 RPS18P62269 152 aaKnown RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 GPS2Q13227 327 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 ITGA9Q13797 1035 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 TPSAB1Q15661 275 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CCNG2Q16589 344 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 LONRF1Q17RB8 773 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 PWWP2BQ6NUJ5 590 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 C16orf89Q6UX73 402 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CLEC18BQ6UXF7 455 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 COLCA1Q6ZS62 124 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 FAM92BQ6ZTR7 304 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 BZW1Q7L1Q6 419 aaKnown RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 AMZ2Q86W34 360 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 LAS2Q8IYD9 372 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 SAMD14Q8IZD0 417 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 LSMEM2Q8N112 164 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 MMP21Q8N119 569 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 KRT222Q8N1A0 295 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 C17orf53Q8N3J3 647 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 NAT8LQ8N9F0 302 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CLEC18CQ8NCF0 446 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 ACVR1CQ8NER5 493 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 OR52E1Q8NGJ3 308 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 STYXQ8WUJ0 223 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 LPGAT1Q92604 370 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF566Q969W8 418 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 TGM7Q96PF1 710 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 OR2A14Q96R47 310 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CCNL2Q96S94 520 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 KIFC1Q9BW19 673 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 XKR8Q9H6D3 395 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 GRPEL1Q9HAV7 217 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 SEMA4BQ9NPR2 832 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 FBXO8Q9NRD0 319 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CHRAC1Q9NRG0 131 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 STARD5Q9NSY2 213 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 CIDEBQ9UHD4 219 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 IKZF3Q9UKT9 509 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 PLAGL1Q9UM63 463 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCAF11-214ENST00000550893 NFS1Q9Y697 457 aa4.64□□□□□ -1.67
SCAF11-214ENST00000550893 ICE1Q9Y2F5 2266 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CROCCQ5TZA2 2017 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CNTRLQ7Z7A1 2325 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 APCP25054 2843 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 C17orf113A0A1B0GUU1 675 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CTAGE15A4D2H0 777 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 FAM90A10PA6NDY2 464 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TLCD2A6NGC4 264 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 OR5K4A6NMS3 321 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 PDZK1P1A8MUH7 402 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF814B7Z6K7 855 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 GOLGA8KD6RF30 607 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 GOLGA8TH3BQL2 631 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 J3KTA2 159 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 NKX2-8O15522 239 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 UGDHO60701 494 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 NIPSNAP2O75323 286 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TSPAN12O95859 305 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 FGF2P09038 288 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CCDC175P0C221 793 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 ATP1B2P14415 290 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms