RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 OR6B1O95007 311 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 CLDN9O95484 217 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 P04436 131 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 TPOP07202 933 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 CNTFP26441 200 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 PTGER1P34995 402 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 PPIAP62937 165 aaKnown RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLC7A5Q01650 507 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 PLGLB1Q02325 96 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 DDX39BQ13838 428 aaKnown RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 GTF2H2Q13888 395 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 UAP1Q16222 522 aaPredicted RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 TSNAXIP1Q2TAA8 658 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 GLE1Q53GS7 698 aaKnown RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 CMPK2Q5EBM0 449 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 PIGGQ5H8A4 983 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 LGSNQ5TDP6 509 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 GTF2H2CQ6P1K8 395 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 CYP20A1Q6UW02 462 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 ACAD11Q709F0 780 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 ST13P4Q8IZP2 240 aaPredicted RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 MMGT1Q8N4V1 131 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLC22A8Q8TCC7 542 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF721Q8TF20 911 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 CA5BP1Q8WTZ4 195 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 ATP6V1E2Q96A05 226 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 SENP5Q96HI0 755 aaPredicted RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 DMRTA2Q96SC8 542 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 MTERF1Q99551 399 aaKnown RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 SERPINI1Q99574 410 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 SPOCK3Q9BQ16 436 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 OR51B5Q9H339 312 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 DDX31Q9H8H2 851 aaKnown RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 IPPKQ9H8X2 491 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 IL1RL2Q9HB29 575 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 DMRT3Q9NQL9 472 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 SACM1LQ9NTJ5 587 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 ESYT3A0FGR9 886 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 HMX2A2RU54 273 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR6C76A6NM76 312 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 STX16-NPEPL1H3BU86 382 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SAP18O00422 153 aaKnown RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 STX16O14662 325 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 BCKDKO14874 412 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 PROM1O43490 865 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 PRKNO60260 465 aaPredicted RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SMIM24O75264 130 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 GUCY1B2O75343 617 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 URI1O94763 535 aaPredicted RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SEMA3DO95025 777 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 ETHE1O95571 254 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 GPR75O95800 540 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 ALDOAP04075 364 aaKnown RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 IGKV3-11P04433 115 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 ALOX15P16050 662 aaPredicted RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 GRNP28799 593 aaKnown RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SERPINB3P29508 390 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SSTR2P30874 369 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SOX3P41225 446 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 GPR85P60893 370 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 RPS13P62277 151 aaKnown RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 HSF1Q00613 529 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 TNFRSF17Q02223 184 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 CPSF6Q16630 551 aaKnown RBP eCLIP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 HYAL4Q2M3T9 481 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC22A10Q63ZE4 541 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 FAM47EQ6ZV65 393 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC29A4Q7RTT9 530 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 PAGE2Q7Z2X7 111 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 GOLGA7Q7Z5G4 137 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 NUDT13Q86X67 352 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 CHERPQ8IWX8 916 aaKnown RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR2M7Q8NG81 312 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC44A1Q8WWI5 657 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 RIT1Q92963 219 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 MRRFQ96E11 262 aaKnown RBP10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 FBXL20Q96IG2 436 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 GPR78Q96P69 363 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 NTMT1Q9BV86 223 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 VPS11Q9H270 941 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZDHHC11Q9H8X9 412 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 NMRK1Q9NWW6 199 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 NINJ2Q9NZG7 142 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
VTI1BP3-201ENST00000550220 CROCCQ5TZA2 2017 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 A0A0A6YYD5 115 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 CAPN14A8MX76 684 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 PLPP1O14494 284 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ADAM10O14672 748 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FGF17O60258 216 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR10H2O60403 315 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SH3BGRLO75368 114 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 GLSO94925 669 aaPredicted RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 HOXD4P09016 255 aaPredicted RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FAM58BPP0C7Q3 252 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC35E2P0CK97 266 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 NR2F6P10588 404 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 BSGP35613 385 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ARL1P40616 181 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms