RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FAM98AQ8NCA5 519 aaKnown RBP12.55□□□□□ -0.4
NUP188-211ENST00000550219 PLPP5Q8NEB5 264 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 NT5CQ8TCD5 201 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 ATP6V1E2Q96A05 226 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 PTCHD1Q96NR3 888 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 CDK15Q96Q40 435 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 ACTR8Q9H981 624 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 TNFRSF12AQ9NP84 129 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 MID1IP1Q9NPA3 183 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 TRPS1Q9UHF7 1281 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 ZFP69BQ9UJL9 534 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 RNF11Q9Y3C5 154 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 RAP2CQ9Y3L5 183 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 A0A0G2JN53 185 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 A8MUA0 341 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 NPIPA5E9PKD4 350 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 H0YIV9 168 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 OR4F21O95013 312 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 HSPA4LO95757 839 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 ENO1P06733 434 aaKnown RBP12.54□□□□□ -0.4
NUP188-211ENST00000550219 ESRRAP11474 423 aaPredicted RBP12.54□□□□□ -0.4
NUP188-211ENST00000550219 MAOAP21397 527 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 GYS2P54840 703 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 BTG2P78543 158 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 SLBPQ14493 270 aaKnown RBP eCLIP12.54□□□□□ -0.4
NUP188-211ENST00000550219 MAPKAPK3Q16644 382 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 PAGE2BQ5JRK9 111 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 ZNF808Q8N4W9 903 aaPredicted RBP12.54□□□□□ -0.4
NUP188-211ENST00000550219 ANKRD53Q8N9V6 530 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
NUP188-211ENST00000550219 CCT6BQ92526 530 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 SCMH1Q96GD3 660 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 C7orf26Q96N11 449 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 GPR137Q96N19 417 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 FRMD6Q96NE9 622 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 AIF1LQ9BQI0 150 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 ZDHHC2Q9UIJ5 367 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 ZNF490Q9ULM2 529 aaPredicted RBP12.54□□□□□ -0.4
NUP188-211ENST00000550219 NPIPA1Q9UND3 350 aa12.54□□□□□ -0.4
NUP188-211ENST00000550219 SVILO95425 2214 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 POLEQ07864 2286 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 URADA6NGE7 173 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SAGE2PA6NJ88 616 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 C4orf51C9J302 202 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 PRMT3O60678 531 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SLC25A12O75746 678 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 RNH1P13489 461 aaKnown RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 HTR1EP28566 365 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 TPP2P29144 1249 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 AHRP35869 848 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 HSF1Q00613 529 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 HYAL2Q12891 473 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 ART3Q13508 389 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.53□□□□□ -0.4
NUP188-211ENST00000550219 UGT3A2Q3SY77 523 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 C10orf62Q5T681 223 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 ZNF468Q5VIY5 522 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 NIPAL1Q6NVV3 410 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 MED27Q6P2C8 311 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 MTFR2Q6P444 385 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 RPTNQ6XPR3 784 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 BNC2Q6ZN30 1099 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 QSOX2Q6ZRP7 698 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 RNF165Q6ZSG1 346 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 NCCRP1Q6ZVX7 275 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 MTERF4Q7Z6M4 381 aaKnown RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 RPS19BP1Q86WX3 136 aaKnown RBP12.53□□□□□ -0.4
NUP188-211ENST00000550219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUP188-211ENST00000550219 KIRREL3Q8IZU9 778 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 CLYBLQ8N0X4 340 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 HORMAD2Q8N7B1 307 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 WDR20Q8TBZ3 569 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 UBE2E3Q969T4 207 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SHCBP1LQ9BZQ2 653 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SLC6A16Q9GZN6 736 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 TRAF6Q9Y4K3 522 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 ZGRF1Q86YA3 2104 aa12.53□□□□□ -0.4
NUP188-211ENST00000550219 SERTM1A2A2V5 107 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 AZIN1O14977 448 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 NEURL1O76050 574 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 SP1P08047 785 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 UROSP10746 265 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 ABOP16442 354 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 ZNF24P17028 368 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 GSTM2P28161 218 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 FOXA1P55317 472 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms