RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 OLAHQ9NV23 265 aa9.1□□□□□ -0.95
HDAC7-229ENST00000549883 LRFN1Q9P244 771 aa9.1□□□□□ -0.95
HDAC7-229ENST00000549883 SLC12A4Q9UP95 1085 aa9.1□□□□□ -0.95
HDAC7-229ENST00000549883 OSGIN2Q9Y236 505 aa9.1□□□□□ -0.95
HDAC7-229ENST00000549883 MRPS33Q9Y291 106 aaKnown RBP9.1□□□□□ -0.95
HDAC7-229ENST00000549883 TIMM22Q9Y584 194 aa9.1□□□□□ -0.95
HDAC7-229ENST00000549883 CLCA3PQ9Y6N3 262 aa9.1□□□□□ -0.95
HDAC7-229ENST00000549883 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF407Q9C0G0 2248 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 PCNX1Q96RV3 2341 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 A0A0G2JMM0 328 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 A0A1W2PPB8 328 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 A0A1W2PRS3 328 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 TLDC2A0PJX2 215 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 KIR3DP1A8MWS1 328 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 WWP2O00308 870 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 PLIN3O60664 434 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ITGA10O75578 1167 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 OR2J2O76002 312 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 RASAL1O95294 804 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 OTCP00480 354 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 SP1P08047 785 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 GSTA1P08263 222 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 FREM3P0C091 2139 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 KRT15P19012 456 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 TAC1P20366 129 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 RFC3P40938 356 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 HLCSP50747 726 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 HK2P52789 917 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 PHEXP78562 749 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 DUSP2Q05923 314 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 TBL3Q12788 808 aaKnown RBP9.09□□□□□ -0.95
HDAC7-229ENST00000549883 IFT88Q13099 833 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 TERF2Q15554 542 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 MAPKAPK3Q16644 382 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ERCC6LQ2NKX8 1250 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 FAM180BQ6P0A1 224 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 CYP20A1Q6UW02 462 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ZYG11AQ6WRX3 759 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 GPRIN3Q6ZVF9 776 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 COMMD6Q7Z4G1 85 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 NUDT13Q86X67 352 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 TDRPQ86YL5 185 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 LGI4Q8N135 537 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 METTL4Q8N3J2 472 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 TMEM132CQ8N3T6 1108 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 CCNYL1Q8N7R7 359 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 BCORP1Q8N888 145 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ST6GALNAC3Q8NDV1 305 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 SELENOMQ8WWX9 145 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 L3HYPDHQ96EM0 354 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 FRMD6Q96NE9 622 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 PSMG3-AS1Q96PY0 264 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF382Q96SR6 550 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 CCDC77Q9BR77 488 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 SHCBP1LQ9BZQ2 653 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 ELOVL6Q9H5J4 265 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 PSD3Q9NYI0 1048 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 PHF11Q9UIL8 331 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 EXPH5Q8NEV8 1989 aa9.09□□□□□ -0.95
HDAC7-229ENST00000549883 SPTBN1Q01082 2364 aaKnown RBP9.09□□□□□ -0.95
HDAC7-229ENST00000549883 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
HDAC7-229ENST00000549883 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
HDAC7-229ENST00000549883 PINLYPA6NC86 204 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 NME2P1O60361 137 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 GLRA3O75311 464 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 SLC25A12O75746 678 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 ZFAND5O76080 213 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 OR6B1O95007 311 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 SEMA3DO95025 777 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 UNC5CO95185 931 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 GPR75O95800 540 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 CLPSP04118 112 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 IGKV3-11P04433 115 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 CT62P0C5K7 136 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 NR2F6P10588 404 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 MYL2P10916 166 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 EDN3P14138 238 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 ALOX15P16050 662 aaPredicted RBP9.08□□□□□ -0.96
HDAC7-229ENST00000549883 CREB1P16220 341 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 KRT4P19013 534 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 NME2P22392 152 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 SERPINB3P29508 390 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 TRHRP34981 398 aaPredicted RBP9.08□□□□□ -0.96
HDAC7-229ENST00000549883 CRHR1P34998 444 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 SOX3P41225 446 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 STT3AP46977 705 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 CYB561P49447 251 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 ARFIP1P53367 373 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 GPR85P60893 370 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 RNF4P78317 190 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 RAE1P78406 368 aaKnown RBP9.08□□□□□ -0.96
HDAC7-229ENST00000549883 HMGCS1Q01581 520 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 RCN2Q14257 317 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 SLC25A25Q6KCM7 469 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 C9orf40Q8IXQ3 194 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 CPSF7Q8N684 471 aaKnown RBP9.08□□□□□ -0.96
HDAC7-229ENST00000549883 C1orf52Q8N6N3 182 aaKnown RBP9.08□□□□□ -0.96
HDAC7-229ENST00000549883 MORN4Q8NDC4 146 aa9.08□□□□□ -0.96
HDAC7-229ENST00000549883 SIMC1Q8NDZ2 872 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms