RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ATOH8Q96SQ7 321 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 ACSS3Q9H6R3 686 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 ALG9Q9H6U8 611 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 NMRAL1Q9HBL8 299 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 DNAJC11Q9NVH1 559 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 WWOXQ9NZC7 414 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 GPRC5BQ9NZH0 403 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 CD274Q9NZQ7 290 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 ZNF490Q9ULM2 529 aaPredicted RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 NPIPA2E9PIF3 369 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 NPIPA3F8WFD2 350 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 H7C1Q1 480 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 C2P06681 752 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 MTHFD2P13995 350 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 HNF4AP41235 474 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 HSD17B7P56937 341 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 STXBP1P61764 594 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 IRF9Q00978 393 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 SLBPQ14493 270 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX54-206ENST00000549271 PCBP2Q15366 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX54-206ENST00000549271 B3GNT6Q6ZMB0 384 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 RAPH1Q70E73 1250 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 VN1R5Q7Z5H4 357 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 CXorf67Q86X51 503 aaPredicted RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 PHC2Q8IXK0 858 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 GPALPP1Q8IXQ4 340 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX54-206ENST00000549271 TTLQ8NG68 377 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 KIF18AQ8NI77 898 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 KCTD4Q8WVF5 259 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 GAL3ST3Q96A11 431 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 WDR34Q96EX3 536 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 VMP1Q96GC9 406 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 GPR78Q96P69 363 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 CAPS2Q9BXY5 557 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 PITHD1Q9GZP4 211 aaPredicted RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 EHD1Q9H4M9 534 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 NT5DC2Q9H857 520 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 CNOT10Q9H9A5 744 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 MTRF1LQ9UGC7 380 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 ACOT9Q9Y305 439 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
DDX54-206ENST00000549271 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
DDX54-206ENST00000549271 TRBV11-1A0A0K0K1C0 115 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 FIGNL2A6NMB9 653 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 UBXN8O00124 270 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 ITGA10O75578 1167 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 MYO1DO94832 1006 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 ACSL3O95573 720 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 ALDOAP04075 364 aaKnown RBP11.28□□□□□ -0.6
DDX54-206ENST00000549271 CD22P20273 847 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 UQCRC1P31930 480 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 PHBP35232 272 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 DOC2AQ14183 400 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 E2F2Q14209 437 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 ADPRMQ3LIE5 342 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 TOR1AIP1Q5JTV8 583 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 ADNP2Q6IQ32 1131 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 PAOXQ6QHF9 649 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 TMIGD1Q6UXZ0 262 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 TBC1D1Q86TI0 1168 aaPredicted RBP11.28□□□□□ -0.6
DDX54-206ENST00000549271 CYP4Z2PQ8N1L4 340 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 SNX31Q8N9S9 440 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 OR5M9Q8NGP3 310 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 SLC44A1Q8WWI5 657 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 EXT2Q93063 718 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 FMO2Q99518 471 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 CD244Q9BZW8 370 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 DEFB127Q9H1M4 99 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 SNX15Q9NRS6 342 aa11.28□□□□□ -0.6
DDX54-206ENST00000549271 ZNF223Q9UK11 482 aaPredicted RBP11.28□□□□□ -0.6
DDX54-206ENST00000549271 YARS2Q9Y2Z4 477 aaKnown RBP11.28□□□□□ -0.6
DDX54-206ENST00000549271 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 A0A087X1B8 175 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 A0A088AWK7 358 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 OR14I1A6ND48 311 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 LRIT2A6NDA9 550 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 RNF212BA8MTL3 300 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 A8MUA0 341 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 CLDN4O14493 209 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 BCKDKO14874 412 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 CLGNO14967 610 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ARHGEF9O43307 516 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 CCNT2O60583 730 aaKnown RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 KERAO60938 352 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ZFAND5O76080 213 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ZNF10P21506 573 aaPredicted RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 HNRNPH1P31943 449 aaKnown RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 HPDP32754 393 aaPredicted RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 CASP2P42575 452 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 RAB38P57729 211 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 BTN3A2P78410 334 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 PCDH1Q08174 1060 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 RUNX2Q13950 521 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 TBCCQ15814 346 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms