RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ALPIP09923 528 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 PRLRP16471 622 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 TCP1P17987 556 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 TFEBP19484 476 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 BCKDHBP21953 392 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CCNCP24863 283 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 MPGP29372 298 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 BMXP51813 675 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 RPS14P62263 151 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 ACSM1Q08AH1 577 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CNTN1Q12860 1018 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 OASLQ15646 514 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 CST6Q15828 149 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 SMN1Q16637 294 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 EOGTQ5NDL2 527 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 DSG4Q86SJ6 1040 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CDKL3Q8IVW4 592 aaPredicted RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 SPATA6LQ8N4H0 392 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 AADATQ8N5Z0 425 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ZNF557Q8N988 423 aaPredicted RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 IPMKQ8NFU5 416 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 OR8H1Q8NGG4 311 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 OR1J2Q8NGS2 313 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 OR8D1Q8WZ84 308 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CORO2AQ92828 525 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 MSANTD3Q96H12 275 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 KRT12Q99456 494 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ABHD6Q9BV23 337 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 FUT8Q9BYC5 575 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 TMEM51Q9NW97 253 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 HEY2Q9UBP5 337 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 RSPH14Q9UHP6 348 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 OSGIN1Q9UJX0 560 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CHKBQ9Y259 395 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CHD5Q8TDI0 1954 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 EP300Q09472 2414 aaPredicted RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 A0A1W2PRV1 198 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ZSCAN5CA6NGD5 496 aaPredicted RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 PAX4O43316 350 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 BUD23O43709 281 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 MMP2P08253 660 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 KRT4P19013 534 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 MAT2AP31153 395 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 NR2C2P49116 596 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 P2RX3P56373 397 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CD81P60033 236 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 SNRPD1P62314 119 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 ENPP2Q13822 863 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ANGPT1Q15389 498 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 TEX44Q53QW1 395 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ANKRD20A2Q5SQ80 823 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ANKRD20A1Q5TYW2 823 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ASPHD1Q5U4P2 390 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ANKRD20A3Q5VUR7 823 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ZNF66Q6ZN08 573 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 HOOK3Q86VS8 718 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 HDDC3Q8N4P3 179 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 PCDH20Q8N6Y1 951 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 ACVR1CQ8NER5 493 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 LPCAT1Q8NF37 534 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 OR2T3Q8NH03 318 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ACTRT1Q8TDG2 376 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ST7LQ8TDW4 575 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 WIPF2Q8TF74 440 aaPredicted RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 SNAPC3Q92966 411 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 TSGA13Q96PP4 275 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 PSKH2Q96QS6 385 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 WRAP53Q9BUR4 548 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 MLPHQ9BV36 600 aaPredicted RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 B3GNT4Q9C0J1 378 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 THSD1Q9NS62 852 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 FBXL12Q9NXK8 326 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 MSRB1Q9NZV6 116 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 FETUBQ9UGM5 382 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 IL36AQ9UHA7 158 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 CA5BQ9Y2D0 317 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 SLCO1B1Q9Y6L6 691 aa3.58□□□□□ -1.84
APAF1-208ENST00000549007 ATXN2Q99700 1313 aaKnown RBP3.58□□□□□ -1.84
APAF1-208ENST00000549007 GOLGA8MH3BSY2 632 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TRIM77I1YAP6 450 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TTI1O43156 1089 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 APBB3O95704 486 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 AGTP01019 485 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RPL22P35268 128 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 DRD3P35462 400 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 COILP38432 576 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 GRIA1P42261 906 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RPS9P46781 194 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 AVPR1BP47901 424 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TPMTP51580 245 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CDH12P55289 794 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 BASP1P80723 227 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 MRPS34P82930 218 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 TUBB2AQ13885 445 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 ELAVL3Q14576 367 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 TRADDQ15628 312 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CCDC6Q16204 474 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms