RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 G3V3Y1 287 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 DYRK3O43781 588 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 ZNF354AO60765 605 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 LDB3O75112 727 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 IGKV3-11P04433 115 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 CCL3P10147 92 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 GABRA1P14867 456 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 CD1DP15813 335 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 STT3AP46977 705 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 IRF8Q02556 426 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 FOLH1Q04609 750 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 PCDH1Q08174 1060 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 AP5B1Q2VPB7 878 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 ZNF791Q3KP31 576 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 C1orf185Q5T7R7 199 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 SLC22A10Q63ZE4 541 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 LRRC70Q7Z2Q7 622 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 LAS2Q8IYD9 372 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 SLC22A8Q8TCC7 542 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 PAQR8Q8TEZ7 354 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 ZNF473Q8WTR7 871 aaKnown RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 ANKRD9Q96BM1 317 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 SENP5Q96HI0 755 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 ART5Q96L15 291 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 UBXN10Q96LJ8 280 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 GPR22Q99680 433 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 FOXC2Q99958 501 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 MAPKAP1Q9BPZ7 522 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 CXXC4Q9H2H0 198 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 MS4A12Q9NXJ0 267 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 QPCTLQ9NXS2 382 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 TUBA8Q9NY65 449 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 B4GALT7Q9UBV7 327 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 Q9UFV3 132 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 MTO1Q9Y2Z2 717 aaKnown RBP11.87□□□□□ -0.51
PTCH1-218ENST00000548945 L3MBTL1Q9Y468 752 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 ABCA2Q9BZC7 2435 aa11.87□□□□□ -0.51
PTCH1-218ENST00000548945 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 MYOCOSA0A1B0GUC4 107 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ATP6AP2A0A1C7CYW4 349 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CCDC188H7C350 402 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ATP6AP2O75787 350 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ETHE1O95571 254 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 S100BP04271 92 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 STMN1P16949 149 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 EPORP19235 508 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CPN2P22792 545 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 MSH2P43246 934 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 DNASE1L1P49184 302 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ARFIP1P53367 373 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ASPHQ12797 758 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CHIT1Q13231 466 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 OR4D1Q15615 310 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ZKSCAN8Q15776 578 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CYS1Q717R9 158 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CREG2Q8IUH2 290 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 KLHL7Q8IXQ5 586 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ZBED8Q8IZ13 594 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CDKL2Q92772 493 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 TANKQ92844 425 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 SPACA9Q96E40 222 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CMTM7Q96FZ5 175 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 RBM18Q96H35 190 aaKnown RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 FBXL20Q96IG2 436 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 DGAT2Q96PD7 388 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CPNE1Q99829 537 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CD244Q9BZW8 370 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ZNF703Q9H7S9 590 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ZFP64Q9NPA5 681 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ACKR4Q9NPB9 350 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 SMYD2Q9NRG4 433 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CD274Q9NZQ7 290 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 CNIH4Q9P003 139 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 TXNDC16Q9P2K2 825 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 ADGRE2Q9UHX3 823 aa11.86□□□□□ -0.51
PTCH1-218ENST00000548945 BOKQ9UMX3 212 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.86□□□□□ -0.51
PTCH1-218ENST00000548945 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-218ENST00000548945 EFCAB8A8MWE9 144 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 FGF17O60258 216 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 CCNT2O60583 730 aaKnown RBP11.85□□□□□ -0.51
PTCH1-218ENST00000548945 CTAG2O75638 210 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 CELA3AP09093 270 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 TLX1P31314 330 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-218ENST00000548945 ADH7P40394 386 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 SSR2P43308 183 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 IST1P53990 364 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 DLX5P56178 289 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 PLIN5Q00G26 463 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 FBXO48Q5FWF7 155 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 DEPDC1Q5TB30 811 aa11.85□□□□□ -0.51
PTCH1-218ENST00000548945 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms