RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
HDAC7-228ENST00000548938 FAM83DQ9H4H8 585 aa13.08□□□□□ -0.32
HDAC7-228ENST00000548938 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
HDAC7-228ENST00000548938 KCND3Q9UK17 655 aa13.08□□□□□ -0.32
HDAC7-228ENST00000548938 CARD8Q9Y2G2 431 aa13.08□□□□□ -0.32
HDAC7-228ENST00000548938 CCDC88CQ9P219 2028 aa13.08□□□□□ -0.32
HDAC7-228ENST00000548938 SAP18O00422 153 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 AKR7A2O43488 359 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 IGSF6O95976 241 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ADAP00813 363 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ARAFP10398 606 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 SDC2P34741 201 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 IL12RB1P42701 662 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 GZMKP49863 264 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 DDI2Q5TDH0 399 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 AGTRAPQ6RW13 159 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 CEACAM20Q6UY09 585 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 USP30Q70CQ3 517 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 IQCF1Q8N6M8 205 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 OR5H6Q8NGV6 325 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 VOPP1Q96AW1 172 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 SLC22A12Q96S37 553 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 LYSMD1Q96S90 227 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 STOX2Q9P2F5 926 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 MALT1Q9UDY8 824 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 LRFN2Q9ULH4 789 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ANGPT4Q9Y264 503 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 RPL36Q9Y3U8 105 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ALG5Q9Y673 324 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 DNMT3AQ9Y6K1 912 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 NINQ8N4C6 2090 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 HELZP42694 1942 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 TRAV19A0A0A6YYK7 116 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 HEPACAM2A8MVW5 462 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 SEMA7AO75326 666 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 LGI1O95970 557 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 IFNA14P01570 189 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ALAS2P22557 587 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 APEX1P27695 318 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 CAV3P56539 151 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ZNF763Q0D2J5 394 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 PRSS53Q2L4Q9 553 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 C12orf73Q69YU5 71 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 FAM180BQ6P0A1 224 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 PLET1Q6UQ28 207 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 CASP12Q6UXS9 341 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 HS6ST3Q8IZP7 471 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 CLDN22Q8N7P3 220 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 OR4M1Q8NGD0 313 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 C2orf15Q8WU43 125 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 BCL7CQ8WUZ0 217 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 METTL2AQ96IZ6 378 aaKnown RBP13.07□□□□□ -0.32
HDAC7-228ENST00000548938 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 CLEC4EQ9ULY5 219 aa13.07□□□□□ -0.32
HDAC7-228ENST00000548938 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 SMLR1H3BR10 107 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 OR10H3O60404 316 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 PSKH1P11801 424 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 BDKRB1P46663 353 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 MAP2K3P46734 347 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 MAN2A2P49641 1150 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 XKP51811 444 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 BTBD16Q32M84 506 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 ATAT1Q5SQI0 421 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 IER5LQ5T953 404 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 IQCF2Q8IXL9 164 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 ZNF557Q8N988 423 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 DEDD2Q8WXF8 326 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 OVCA2Q8WZ82 227 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 NDOR1Q9UHB4 597 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 SPIN1Q9Y657 262 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 CLCA3PQ9Y6N3 262 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 ZSCAN5BA6NJL1 495 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 OR2AG2A6NM03 316 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 APOL3O95236 402 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 GSTM1P09488 218 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 FURINP09958 794 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 CPN2P22792 545 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 OR1D2P34982 312 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 ETV5P41161 510 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 MAPK8P45983 427 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 OR3A3P47888 321 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 STK19P49842 368 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 ETV1P50549 477 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 PTPN5P54829 565 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 ILKQ13418 452 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 LCN1P1Q5VSP4 162 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 PDZD3Q86UT5 571 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms